Gene : Cre10.g450550 C. reinhardtii v5.6
Defline:  (1 of 8) 1.14.12.20 - Pheophorbide a oxygenase / Pheide a oxygenase Genomic Order:  713
Name:  ? Cre10.g450550 Secondary Identifier:  ? PAC:30790419
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii PWY-6927 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre10.g450550 0.5kb upstream 0.5kb upstream 7193 true chromosome_10: 4264060-4271252 Chlamydomonas reinhardtii
Cre10.g450550 0.5kb upstream 0.5kb upstream 500 false chromosome_10: 4264060-4264559 Chlamydomonas reinhardtii
Cre10.g450550 0.5kb downstream 0.5kb downstream 7193 true chromosome_10: 4264560-4271752 Chlamydomonas reinhardtii
Cre10.g450550 0.5kb downstream 0.5kb downstream 500 false chromosome_10: 4271253-4271752 Chlamydomonas reinhardtii
Cre10.g450550 1.0kb upstream 1.0kb upstream 7693 true chromosome_10: 4263560-4271252 Chlamydomonas reinhardtii
Cre10.g450550 1.0kb upstream 1.0kb upstream 1000 false chromosome_10: 4263560-4264559 Chlamydomonas reinhardtii
Cre10.g450550 1.0kb downstream 1.0kb downstream 7693 true chromosome_10: 4264560-4272252 Chlamydomonas reinhardtii
Cre10.g450550 1.0kb downstream 1.0kb downstream 1000 false chromosome_10: 4271253-4272252 Chlamydomonas reinhardtii
Cre10.g450550 2.0kb upstream 2.0kb upstream 8693 true chromosome_10: 4262560-4271252 Chlamydomonas reinhardtii
Cre10.g450550 2.0kb upstream 2.0kb upstream 2000 false chromosome_10: 4262560-4264559 Chlamydomonas reinhardtii
Cre10.g450550 2.0kb downstream 2.0kb downstream 8693 true chromosome_10: 4264560-4273252 Chlamydomonas reinhardtii
Cre10.g450550 2.0kb downstream 2.0kb downstream 2000 false chromosome_10: 4271253-4273252 Chlamydomonas reinhardtii
Cre10.g450550 5.0kb upstream 5.0kb upstream 11693 true chromosome_10: 4259560-4271252 Chlamydomonas reinhardtii
Cre10.g450550 5.0kb upstream 5.0kb upstream 5000 false chromosome_10: 4259560-4264559 Chlamydomonas reinhardtii
Cre10.g450550 5.0kb downstream 5.0kb downstream 11693 true chromosome_10: 4264560-4276252 Chlamydomonas reinhardtii
Cre10.g450550 5.0kb downstream 5.0kb downstream 5000 false chromosome_10: 4271253-4276252 Chlamydomonas reinhardtii
Cre10.g450550 10.0kb upstream 10.0kb upstream 16693 true chromosome_10: 4254560-4271252 Chlamydomonas reinhardtii
Cre10.g450550 10.0kb upstream 10.0kb upstream 10000 false chromosome_10: 4254560-4264559 Chlamydomonas reinhardtii
Cre10.g450550 10.0kb downstream 10.0kb downstream 16693 true chromosome_10: 4264560-4281252 Chlamydomonas reinhardtii
Cre10.g450550 10.0kb downstream 10.0kb downstream 10000 false chromosome_10: 4271253-4281252 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124113463 5260 Chlorophyte View MSA
123429167 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.557        
cufflinks 1.306        
cufflinks 0.958        
cufflinks 1.136        
cufflinks 1.119        
cufflinks 1.237        
cufflinks 0.994        
cufflinks 1.466        
cufflinks 1.823        
cufflinks 0.638        
cufflinks 0.66        
cufflinks 1.064        
cufflinks 1.237        
cufflinks 1.124        
cufflinks 0.744        
cufflinks 2.105        
cufflinks 2.86       High
cufflinks 1.057        
cufflinks 0.129       Low
cufflinks 0.3       Low
cufflinks 1.066        
cufflinks 2.768       High
cufflinks 0.325       Low
cufflinks 1.323        
cufflinks 2.708       High
cufflinks 3.47932 0.415426 6.54321    
cufflinks 4.68939 0.355761 9.02302    
cufflinks 4.72459 0.0 10.2205    
cufflinks 2.79605 0.252895 5.33921    
cufflinks 4.25947 0.430045 8.08889    

0 Strain