Gene : SRR28B C. reinhardtii v5.6
Primary Identifier:  ? Cre10.g451600 Defline:  (1 of 1) PF00059//PF00704//PF14295 - Lectin C-type domain (Lectin_C) // Glycosyl hydrolases family 18 (Glyco_hydro_18) // PAN domain (PAN_4)
Genomic Order:  737 Name:  ? Cre10.g451600
Secondary Identifier:  ? PAC:30790087
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii PWY-6902 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre10.g451600 0.5kb upstream 0.5kb upstream 62612 true chromosome_10: 4407962-4470573 Chlamydomonas reinhardtii
Cre10.g451600 0.5kb upstream 0.5kb upstream 500 false chromosome_10: 4407962-4408461 Chlamydomonas reinhardtii
Cre10.g451600 0.5kb downstream 0.5kb downstream 62612 true chromosome_10: 4408462-4471073 Chlamydomonas reinhardtii
Cre10.g451600 0.5kb downstream 0.5kb downstream 500 false chromosome_10: 4470574-4471073 Chlamydomonas reinhardtii
Cre10.g451600 1.0kb upstream 1.0kb upstream 63112 true chromosome_10: 4407462-4470573 Chlamydomonas reinhardtii
Cre10.g451600 1.0kb upstream 1.0kb upstream 1000 false chromosome_10: 4407462-4408461 Chlamydomonas reinhardtii
Cre10.g451600 1.0kb downstream 1.0kb downstream 63112 true chromosome_10: 4408462-4471573 Chlamydomonas reinhardtii
Cre10.g451600 1.0kb downstream 1.0kb downstream 1000 false chromosome_10: 4470574-4471573 Chlamydomonas reinhardtii
Cre10.g451600 2.0kb upstream 2.0kb upstream 64112 true chromosome_10: 4406462-4470573 Chlamydomonas reinhardtii
Cre10.g451600 2.0kb upstream 2.0kb upstream 2000 false chromosome_10: 4406462-4408461 Chlamydomonas reinhardtii
Cre10.g451600 2.0kb downstream 2.0kb downstream 64112 true chromosome_10: 4408462-4472573 Chlamydomonas reinhardtii
Cre10.g451600 2.0kb downstream 2.0kb downstream 2000 false chromosome_10: 4470574-4472573 Chlamydomonas reinhardtii
Cre10.g451600 5.0kb upstream 5.0kb upstream 67112 true chromosome_10: 4403462-4470573 Chlamydomonas reinhardtii
Cre10.g451600 5.0kb upstream 5.0kb upstream 5000 false chromosome_10: 4403462-4408461 Chlamydomonas reinhardtii
Cre10.g451600 5.0kb downstream 5.0kb downstream 67112 true chromosome_10: 4408462-4475573 Chlamydomonas reinhardtii
Cre10.g451600 5.0kb downstream 5.0kb downstream 5000 false chromosome_10: 4470574-4475573 Chlamydomonas reinhardtii
Cre10.g451600 10.0kb upstream 10.0kb upstream 72112 true chromosome_10: 4398462-4470573 Chlamydomonas reinhardtii
Cre10.g451600 10.0kb upstream 10.0kb upstream 10000 false chromosome_10: 4398462-4408461 Chlamydomonas reinhardtii
Cre10.g451600 10.0kb downstream 10.0kb downstream 72112 true chromosome_10: 4408462-4480573 Chlamydomonas reinhardtii
Cre10.g451600 10.0kb downstream 10.0kb downstream 10000 false chromosome_10: 4470574-4480573 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124080592 5260 Chlorophyte Singleton cluster - no MSA
123398367 5275 Viridiplantae Singleton cluster - no MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.045     Low Low
cufflinks 0.168     Low  
cufflinks 0.204        
cufflinks 0.201        
cufflinks 0.132     Low  
cufflinks 0.123     Low  
cufflinks 0.26        
cufflinks 0.22     Low  
cufflinks 0.077     Low Low
cufflinks 0.047     Low Low
cufflinks 0.286       High
cufflinks 0.202     Low  
cufflinks 0.049     Low Low
cufflinks 0.125     Low  
cufflinks 0.146     Low  
cufflinks 0.096     Low  
cufflinks 0.219        
cufflinks 0.158     Low  
cufflinks 0.06     Low Low
cufflinks 0.328       High
cufflinks 0.168        
cufflinks 0.184        
cufflinks 0.217        
cufflinks 0.246        
cufflinks 0.245        
cufflinks 2.13128 0.0 4.57898   High
cufflinks 0.323985 0.0 0.661506 Low Low
cufflinks 1.34155 0.0 3.05042    
cufflinks 1.58195 0.0 3.3705    
cufflinks 3.93745 0.0 8.86805   High

0 Strain