Gene : Cre11.g477250 C. reinhardtii v5.6
Defline:  (1 of 1) PF10187 - N-terminal domain of NEFA-interacting nuclear protein NIP30 (Nefa_Nip30_N) Genomic Order:  391
Name:  ? Cre11.g477250 Secondary Identifier:  ? PAC:30775687
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre11.g477250 0.5kb upstream 0.5kb upstream 4620 true chromosome_11: 2764425-2769044 Chlamydomonas reinhardtii
Cre11.g477250 0.5kb upstream 0.5kb upstream 500 false chromosome_11: 2768545-2769044 Chlamydomonas reinhardtii
Cre11.g477250 0.5kb downstream 0.5kb downstream 4620 true chromosome_11: 2763925-2768544 Chlamydomonas reinhardtii
Cre11.g477250 0.5kb downstream 0.5kb downstream 500 false chromosome_11: 2763925-2764424 Chlamydomonas reinhardtii
Cre11.g477250 1.0kb upstream 1.0kb upstream 5120 true chromosome_11: 2764425-2769544 Chlamydomonas reinhardtii
Cre11.g477250 1.0kb upstream 1.0kb upstream 1000 false chromosome_11: 2768545-2769544 Chlamydomonas reinhardtii
Cre11.g477250 1.0kb downstream 1.0kb downstream 5120 true chromosome_11: 2763425-2768544 Chlamydomonas reinhardtii
Cre11.g477250 1.0kb downstream 1.0kb downstream 1000 false chromosome_11: 2763425-2764424 Chlamydomonas reinhardtii
Cre11.g477250 2.0kb upstream 2.0kb upstream 6120 true chromosome_11: 2764425-2770544 Chlamydomonas reinhardtii
Cre11.g477250 2.0kb upstream 2.0kb upstream 2000 false chromosome_11: 2768545-2770544 Chlamydomonas reinhardtii
Cre11.g477250 2.0kb downstream 2.0kb downstream 6120 true chromosome_11: 2762425-2768544 Chlamydomonas reinhardtii
Cre11.g477250 2.0kb downstream 2.0kb downstream 2000 false chromosome_11: 2762425-2764424 Chlamydomonas reinhardtii
Cre11.g477250 5.0kb upstream 5.0kb upstream 9120 true chromosome_11: 2764425-2773544 Chlamydomonas reinhardtii
Cre11.g477250 5.0kb upstream 5.0kb upstream 5000 false chromosome_11: 2768545-2773544 Chlamydomonas reinhardtii
Cre11.g477250 5.0kb downstream 5.0kb downstream 9120 true chromosome_11: 2759425-2768544 Chlamydomonas reinhardtii
Cre11.g477250 5.0kb downstream 5.0kb downstream 5000 false chromosome_11: 2759425-2764424 Chlamydomonas reinhardtii
Cre11.g477250 10.0kb upstream 10.0kb upstream 14120 true chromosome_11: 2764425-2778544 Chlamydomonas reinhardtii
Cre11.g477250 10.0kb upstream 10.0kb upstream 10000 false chromosome_11: 2768545-2778544 Chlamydomonas reinhardtii
Cre11.g477250 10.0kb downstream 10.0kb downstream 14120 true chromosome_11: 2754425-2768544 Chlamydomonas reinhardtii
Cre11.g477250 10.0kb downstream 10.0kb downstream 10000 false chromosome_11: 2754425-2764424 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109529 5260 Chlorophyte View MSA
123425229 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.104       Low
cufflinks 3.145        
cufflinks 2.626        
cufflinks 2.934        
cufflinks 2.663        
cufflinks 2.85        
cufflinks 3.251        
cufflinks 3.509       High
cufflinks 2.018        
cufflinks 0.84       Low
cufflinks 2.39        
cufflinks 3.083        
cufflinks 1.629        
cufflinks 3.201        
cufflinks 2.201        
cufflinks 2.476        
cufflinks 2.484        
cufflinks 2.557        
cufflinks 0.732       Low
cufflinks 3.696       High
cufflinks 2.327        
cufflinks 2.319        
cufflinks 2.481        
cufflinks 3.059        
cufflinks 2.367        
cufflinks 2.60257 0.238463 4.96668   Low
cufflinks 6.82548 1.55863 12.0923    
cufflinks 4.21068 0.0 9.01042    
cufflinks 6.58386 1.11804 12.0497    
cufflinks 13.0992 2.62008 23.5784   High

0 Strain