Gene : Cre11.g478850 C. reinhardtii v5.6
Defline:  (1 of 16) PF04755 - PAP_fibrillin (PAP_fibrillin) Genomic Order:  427
Name:  ? Cre11.g478850 Secondary Identifier:  ? PAC:30775664
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre11.g478850 0.5kb upstream 0.5kb upstream 4174 true chromosome_11: 3045866-3050039 Chlamydomonas reinhardtii
Cre11.g478850 0.5kb upstream 0.5kb upstream 500 false chromosome_11: 3045866-3046365 Chlamydomonas reinhardtii
Cre11.g478850 0.5kb downstream 0.5kb downstream 4174 true chromosome_11: 3046366-3050539 Chlamydomonas reinhardtii
Cre11.g478850 0.5kb downstream 0.5kb downstream 500 false chromosome_11: 3050040-3050539 Chlamydomonas reinhardtii
Cre11.g478850 1.0kb upstream 1.0kb upstream 4674 true chromosome_11: 3045366-3050039 Chlamydomonas reinhardtii
Cre11.g478850 1.0kb upstream 1.0kb upstream 1000 false chromosome_11: 3045366-3046365 Chlamydomonas reinhardtii
Cre11.g478850 1.0kb downstream 1.0kb downstream 4674 true chromosome_11: 3046366-3051039 Chlamydomonas reinhardtii
Cre11.g478850 1.0kb downstream 1.0kb downstream 1000 false chromosome_11: 3050040-3051039 Chlamydomonas reinhardtii
Cre11.g478850 2.0kb upstream 2.0kb upstream 5674 true chromosome_11: 3044366-3050039 Chlamydomonas reinhardtii
Cre11.g478850 2.0kb upstream 2.0kb upstream 2000 false chromosome_11: 3044366-3046365 Chlamydomonas reinhardtii
Cre11.g478850 2.0kb downstream 2.0kb downstream 5674 true chromosome_11: 3046366-3052039 Chlamydomonas reinhardtii
Cre11.g478850 2.0kb downstream 2.0kb downstream 2000 false chromosome_11: 3050040-3052039 Chlamydomonas reinhardtii
Cre11.g478850 5.0kb upstream 5.0kb upstream 8674 true chromosome_11: 3041366-3050039 Chlamydomonas reinhardtii
Cre11.g478850 5.0kb upstream 5.0kb upstream 5000 false chromosome_11: 3041366-3046365 Chlamydomonas reinhardtii
Cre11.g478850 5.0kb downstream 5.0kb downstream 8674 true chromosome_11: 3046366-3055039 Chlamydomonas reinhardtii
Cre11.g478850 5.0kb downstream 5.0kb downstream 5000 false chromosome_11: 3050040-3055039 Chlamydomonas reinhardtii
Cre11.g478850 10.0kb upstream 10.0kb upstream 13674 true chromosome_11: 3036366-3050039 Chlamydomonas reinhardtii
Cre11.g478850 10.0kb upstream 10.0kb upstream 10000 false chromosome_11: 3036366-3046365 Chlamydomonas reinhardtii
Cre11.g478850 10.0kb downstream 10.0kb downstream 13674 true chromosome_11: 3046366-3060039 Chlamydomonas reinhardtii
Cre11.g478850 10.0kb downstream 10.0kb downstream 10000 false chromosome_11: 3050040-3060039 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111360 5260 Chlorophyte View MSA
123427631 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.144        
cufflinks 1.943        
cufflinks 1.654        
cufflinks 1.69        
cufflinks 1.577        
cufflinks 1.648        
cufflinks 1.591        
cufflinks 1.877        
cufflinks 2.284       High
cufflinks 1.566        
cufflinks 1.015       Low
cufflinks 1.842        
cufflinks 1.594        
cufflinks 2.046        
cufflinks 1.185       Low
cufflinks 2.214        
cufflinks 2.665       High
cufflinks 1.813        
cufflinks 0.873       Low
cufflinks 1.855        
cufflinks 1.474        
cufflinks 1.949        
cufflinks 1.587        
cufflinks 1.927        
cufflinks 2.836       High
cufflinks 5.59027 0.78979 10.3907   High
cufflinks 4.95129 0.349325 9.55325    
cufflinks 3.03813 0.0 6.93408    
cufflinks 6.19834 0.950299 11.4464   High
cufflinks 6.30238 0.971288 11.6335   High

0 Strain