Gene : HDA10 C. reinhardtii v5.6
Primary Identifier:  ? Cre11.g477800 Defline:  (1 of 1) PTHR10625//PTHR10625:SF119 - HISTONE DEACETYLASE // SUBFAMILY NOT NAMED
Genomic Order:  402 Name:  ? Cre11.g477800
Secondary Identifier:  ? PAC:30775456
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre11.g477800 0.5kb upstream 0.5kb upstream 12553 true chromosome_11: 2869505-2882057 Chlamydomonas reinhardtii
Cre11.g477800 0.5kb upstream 0.5kb upstream 500 false chromosome_11: 2869505-2870004 Chlamydomonas reinhardtii
Cre11.g477800 0.5kb downstream 0.5kb downstream 12553 true chromosome_11: 2870005-2882557 Chlamydomonas reinhardtii
Cre11.g477800 0.5kb downstream 0.5kb downstream 500 false chromosome_11: 2882058-2882557 Chlamydomonas reinhardtii
Cre11.g477800 1.0kb upstream 1.0kb upstream 13053 true chromosome_11: 2869005-2882057 Chlamydomonas reinhardtii
Cre11.g477800 1.0kb upstream 1.0kb upstream 1000 false chromosome_11: 2869005-2870004 Chlamydomonas reinhardtii
Cre11.g477800 1.0kb downstream 1.0kb downstream 13053 true chromosome_11: 2870005-2883057 Chlamydomonas reinhardtii
Cre11.g477800 1.0kb downstream 1.0kb downstream 1000 false chromosome_11: 2882058-2883057 Chlamydomonas reinhardtii
Cre11.g477800 2.0kb upstream 2.0kb upstream 14053 true chromosome_11: 2868005-2882057 Chlamydomonas reinhardtii
Cre11.g477800 2.0kb upstream 2.0kb upstream 2000 false chromosome_11: 2868005-2870004 Chlamydomonas reinhardtii
Cre11.g477800 2.0kb downstream 2.0kb downstream 14053 true chromosome_11: 2870005-2884057 Chlamydomonas reinhardtii
Cre11.g477800 2.0kb downstream 2.0kb downstream 2000 false chromosome_11: 2882058-2884057 Chlamydomonas reinhardtii
Cre11.g477800 5.0kb upstream 5.0kb upstream 17053 true chromosome_11: 2865005-2882057 Chlamydomonas reinhardtii
Cre11.g477800 5.0kb upstream 5.0kb upstream 5000 false chromosome_11: 2865005-2870004 Chlamydomonas reinhardtii
Cre11.g477800 5.0kb downstream 5.0kb downstream 17053 true chromosome_11: 2870005-2887057 Chlamydomonas reinhardtii
Cre11.g477800 5.0kb downstream 5.0kb downstream 5000 false chromosome_11: 2882058-2887057 Chlamydomonas reinhardtii
Cre11.g477800 10.0kb upstream 10.0kb upstream 22053 true chromosome_11: 2860005-2882057 Chlamydomonas reinhardtii
Cre11.g477800 10.0kb upstream 10.0kb upstream 10000 false chromosome_11: 2860005-2870004 Chlamydomonas reinhardtii
Cre11.g477800 10.0kb downstream 10.0kb downstream 22053 true chromosome_11: 2870005-2892057 Chlamydomonas reinhardtii
Cre11.g477800 10.0kb downstream 10.0kb downstream 10000 false chromosome_11: 2882058-2892057 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112189 5260 Chlorophyte View MSA
123423397 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.503        
cufflinks 1.311       High
cufflinks 0.766        
cufflinks 0.948        
cufflinks 1.04        
cufflinks 0.938        
cufflinks 0.944        
cufflinks 1.136        
cufflinks 0.729        
cufflinks 0.338       Low
cufflinks 0.65        
cufflinks 0.998        
cufflinks 0.797        
cufflinks 0.952        
cufflinks 0.99        
cufflinks 0.619        
cufflinks 0.641        
cufflinks 0.956        
cufflinks 0.106       Low
cufflinks 0.697        
cufflinks 0.834        
cufflinks 0.646        
cufflinks 1.292       High
cufflinks 0.996        
cufflinks 0.819        
cufflinks 3.28389 0.542031 6.02575    
cufflinks 5.4022 1.2229 9.5815   High
cufflinks 6.66858 0.0 13.516   High
cufflinks 3.06578 0.486989 5.64458    
cufflinks 3.40736 0.523121 6.29159    

0 Strain