Gene : CAX6 C. reinhardtii v5.6
Primary Identifier:  ? Cre11.g479600 Defline:  (1 of 1) K05849 - solute carrier family 8 (sodium/calcium exchanger) (SLC8A, NCX)
Genomic Order:  444 Name:  ? Cre11.g479600
Secondary Identifier:  ? PAC:30775722
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre11.g479600 0.5kb upstream 0.5kb upstream 9596 true chromosome_11: 3225090-3234685 Chlamydomonas reinhardtii
Cre11.g479600 0.5kb upstream 0.5kb upstream 500 false chromosome_11: 3234186-3234685 Chlamydomonas reinhardtii
Cre11.g479600 0.5kb downstream 0.5kb downstream 9596 true chromosome_11: 3224590-3234185 Chlamydomonas reinhardtii
Cre11.g479600 0.5kb downstream 0.5kb downstream 500 false chromosome_11: 3224590-3225089 Chlamydomonas reinhardtii
Cre11.g479600 1.0kb upstream 1.0kb upstream 10096 true chromosome_11: 3225090-3235185 Chlamydomonas reinhardtii
Cre11.g479600 1.0kb upstream 1.0kb upstream 1000 false chromosome_11: 3234186-3235185 Chlamydomonas reinhardtii
Cre11.g479600 1.0kb downstream 1.0kb downstream 10096 true chromosome_11: 3224090-3234185 Chlamydomonas reinhardtii
Cre11.g479600 1.0kb downstream 1.0kb downstream 1000 false chromosome_11: 3224090-3225089 Chlamydomonas reinhardtii
Cre11.g479600 2.0kb upstream 2.0kb upstream 11096 true chromosome_11: 3225090-3236185 Chlamydomonas reinhardtii
Cre11.g479600 2.0kb upstream 2.0kb upstream 2000 false chromosome_11: 3234186-3236185 Chlamydomonas reinhardtii
Cre11.g479600 2.0kb downstream 2.0kb downstream 11096 true chromosome_11: 3223090-3234185 Chlamydomonas reinhardtii
Cre11.g479600 2.0kb downstream 2.0kb downstream 2000 false chromosome_11: 3223090-3225089 Chlamydomonas reinhardtii
Cre11.g479600 5.0kb upstream 5.0kb upstream 14096 true chromosome_11: 3225090-3239185 Chlamydomonas reinhardtii
Cre11.g479600 5.0kb upstream 5.0kb upstream 5000 false chromosome_11: 3234186-3239185 Chlamydomonas reinhardtii
Cre11.g479600 5.0kb downstream 5.0kb downstream 14096 true chromosome_11: 3220090-3234185 Chlamydomonas reinhardtii
Cre11.g479600 5.0kb downstream 5.0kb downstream 5000 false chromosome_11: 3220090-3225089 Chlamydomonas reinhardtii
Cre11.g479600 10.0kb upstream 10.0kb upstream 19096 true chromosome_11: 3225090-3244185 Chlamydomonas reinhardtii
Cre11.g479600 10.0kb upstream 10.0kb upstream 10000 false chromosome_11: 3234186-3244185 Chlamydomonas reinhardtii
Cre11.g479600 10.0kb downstream 10.0kb downstream 19096 true chromosome_11: 3215090-3234185 Chlamydomonas reinhardtii
Cre11.g479600 10.0kb downstream 10.0kb downstream 10000 false chromosome_11: 3215090-3225089 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124076656 5260 Chlorophyte Singleton cluster - no MSA
123427764 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.964        
cufflinks 6.686        
cufflinks 4.213        
cufflinks 5.32        
cufflinks 6.879        
cufflinks 4.843        
cufflinks 6.399        
cufflinks 8.012        
cufflinks 4.224        
cufflinks 0.553       Low
cufflinks 4.5        
cufflinks 5.748        
cufflinks 4.956        
cufflinks 4.243        
cufflinks 6.237        
cufflinks 4.005        
cufflinks 9.221        
cufflinks 4.165        
cufflinks 2.696       Low
cufflinks 8.27        
cufflinks 7.141        
cufflinks 11.142       High
cufflinks 2.266       Low
cufflinks 8.897        
cufflinks 14.483     High High
cufflinks 11.0246 0.40569 21.6436   High
cufflinks 23.0731 0.19642 45.9497    
cufflinks 61.523 0.0 135.34 High  
cufflinks 17.5752 0.0 38.5913   High
cufflinks 11.283 0.382039 22.184   Low

0 Strain