Gene : Cre11.g481900 C. reinhardtii v5.6
Defline:  (1 of 1) K15559 - regulator of Ty1 transposition protein 103 (RTT103) Genomic Order:  502
Name:  ? Cre11.g481900 Secondary Identifier:  ? PAC:30776009
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre11.g481900 0.5kb upstream 0.5kb upstream 5852 true chromosome_11: 3594631-3600482 Chlamydomonas reinhardtii
Cre11.g481900 0.5kb upstream 0.5kb upstream 500 false chromosome_11: 3599983-3600482 Chlamydomonas reinhardtii
Cre11.g481900 0.5kb downstream 0.5kb downstream 5852 true chromosome_11: 3594131-3599982 Chlamydomonas reinhardtii
Cre11.g481900 0.5kb downstream 0.5kb downstream 500 false chromosome_11: 3594131-3594630 Chlamydomonas reinhardtii
Cre11.g481900 1.0kb upstream 1.0kb upstream 6352 true chromosome_11: 3594631-3600982 Chlamydomonas reinhardtii
Cre11.g481900 1.0kb upstream 1.0kb upstream 1000 false chromosome_11: 3599983-3600982 Chlamydomonas reinhardtii
Cre11.g481900 1.0kb downstream 1.0kb downstream 6352 true chromosome_11: 3593631-3599982 Chlamydomonas reinhardtii
Cre11.g481900 1.0kb downstream 1.0kb downstream 1000 false chromosome_11: 3593631-3594630 Chlamydomonas reinhardtii
Cre11.g481900 2.0kb upstream 2.0kb upstream 7352 true chromosome_11: 3594631-3601982 Chlamydomonas reinhardtii
Cre11.g481900 2.0kb upstream 2.0kb upstream 2000 false chromosome_11: 3599983-3601982 Chlamydomonas reinhardtii
Cre11.g481900 2.0kb downstream 2.0kb downstream 7352 true chromosome_11: 3592631-3599982 Chlamydomonas reinhardtii
Cre11.g481900 2.0kb downstream 2.0kb downstream 2000 false chromosome_11: 3592631-3594630 Chlamydomonas reinhardtii
Cre11.g481900 5.0kb upstream 5.0kb upstream 10352 true chromosome_11: 3594631-3604982 Chlamydomonas reinhardtii
Cre11.g481900 5.0kb upstream 5.0kb upstream 5000 false chromosome_11: 3599983-3604982 Chlamydomonas reinhardtii
Cre11.g481900 5.0kb downstream 5.0kb downstream 10352 true chromosome_11: 3589631-3599982 Chlamydomonas reinhardtii
Cre11.g481900 5.0kb downstream 5.0kb downstream 5000 false chromosome_11: 3589631-3594630 Chlamydomonas reinhardtii
Cre11.g481900 10.0kb upstream 10.0kb upstream 15352 true chromosome_11: 3594631-3609982 Chlamydomonas reinhardtii
Cre11.g481900 10.0kb upstream 10.0kb upstream 10000 false chromosome_11: 3599983-3609982 Chlamydomonas reinhardtii
Cre11.g481900 10.0kb downstream 10.0kb downstream 15352 true chromosome_11: 3584631-3599982 Chlamydomonas reinhardtii
Cre11.g481900 10.0kb downstream 10.0kb downstream 10000 false chromosome_11: 3584631-3594630 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124077248 5260 Chlorophyte View MSA
123428880 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.881       Low
cufflinks 3.699       High
cufflinks 2.122        
cufflinks 2.402        
cufflinks 3.032        
cufflinks 3.126        
cufflinks 3.966       High
cufflinks 3.157        
cufflinks 1.206        
cufflinks 0.755       Low
cufflinks 2.046        
cufflinks 3.262        
cufflinks 1.313        
cufflinks 3.057        
cufflinks 2.487        
cufflinks 1.911        
cufflinks 0.916       Low
cufflinks 2.374        
cufflinks 0.654       Low
cufflinks 2.403        
cufflinks 2.654        
cufflinks 1.276        
cufflinks 3.225        
cufflinks 2.581        
cufflinks 1.351        
cufflinks 8.90088 1.20272 16.599   High
cufflinks 17.5493 4.71882 30.3797   High
cufflinks 4.96701 0.0 10.2792    
cufflinks 5.20303 0.88203 9.52402   Low
cufflinks 12.509 2.40831 22.6098   High

0 Strain