Gene : RPC19 C. reinhardtii v5.6
Primary Identifier:  ? Cre12.g484100 Defline:  (1 of 1) K03020 - DNA-directed RNA polymerases I and III subunit RPAC2 (RPC19, POLR1D)
Genomic Order:  16 Name:  ? Cre12.g484100
Secondary Identifier:  ? PAC:30793052
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g484100 0.5kb upstream 0.5kb upstream 2742 true chromosome_12: 100766-103507 Chlamydomonas reinhardtii
Cre12.g484100 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 100766-101265 Chlamydomonas reinhardtii
Cre12.g484100 0.5kb downstream 0.5kb downstream 2742 true chromosome_12: 101266-104007 Chlamydomonas reinhardtii
Cre12.g484100 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 103508-104007 Chlamydomonas reinhardtii
Cre12.g484100 1.0kb upstream 1.0kb upstream 3242 true chromosome_12: 100266-103507 Chlamydomonas reinhardtii
Cre12.g484100 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 100266-101265 Chlamydomonas reinhardtii
Cre12.g484100 1.0kb downstream 1.0kb downstream 3242 true chromosome_12: 101266-104507 Chlamydomonas reinhardtii
Cre12.g484100 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 103508-104507 Chlamydomonas reinhardtii
Cre12.g484100 2.0kb upstream 2.0kb upstream 4242 true chromosome_12: 99266-103507 Chlamydomonas reinhardtii
Cre12.g484100 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 99266-101265 Chlamydomonas reinhardtii
Cre12.g484100 2.0kb downstream 2.0kb downstream 4242 true chromosome_12: 101266-105507 Chlamydomonas reinhardtii
Cre12.g484100 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 103508-105507 Chlamydomonas reinhardtii
Cre12.g484100 5.0kb upstream 5.0kb upstream 7242 true chromosome_12: 96266-103507 Chlamydomonas reinhardtii
Cre12.g484100 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 96266-101265 Chlamydomonas reinhardtii
Cre12.g484100 5.0kb downstream 5.0kb downstream 7242 true chromosome_12: 101266-108507 Chlamydomonas reinhardtii
Cre12.g484100 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 103508-108507 Chlamydomonas reinhardtii
Cre12.g484100 10.0kb upstream 10.0kb upstream 12242 true chromosome_12: 91266-103507 Chlamydomonas reinhardtii
Cre12.g484100 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 91266-101265 Chlamydomonas reinhardtii
Cre12.g484100 10.0kb downstream 10.0kb downstream 12242 true chromosome_12: 101266-113507 Chlamydomonas reinhardtii
Cre12.g484100 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 103508-113507 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109847 5260 Chlorophyte View MSA
123424853 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.156     High  
cufflinks 18.111     High High
cufflinks 12.198        
cufflinks 12.696        
cufflinks 14.23     High  
cufflinks 17.022     High  
cufflinks 16.726     High  
cufflinks 15.039        
cufflinks 12.348     High  
cufflinks 7.131     High Low
cufflinks 13.459        
cufflinks 13.991        
cufflinks 13.566     High  
cufflinks 14.945     High  
cufflinks 12.071        
cufflinks 19.392     High High
cufflinks 4.654       Low
cufflinks 10.803        
cufflinks 8.546     High  
cufflinks 16.164     High  
cufflinks 13.16     High  
cufflinks 7.261       Low
cufflinks 14.544     High  
cufflinks 17.085     High  
cufflinks 5.061       Low
cufflinks 65.213 0.0 130.884 High High
cufflinks 28.8868 7.80129 49.9722 High  
cufflinks 4.02641 0.0 8.78229   Low
cufflinks 19.5152 2.16683 36.8636   Low
cufflinks 33.0765 5.44447 60.7085 High High

0 Strain