Gene : Cre11.g467647 C. reinhardtii v5.6
Defline:  (1 of 1) K12179 - COP9 signalosome complex subunit 6 (COPS6, CSN6) Genomic Order:  123
Name:  ? Cre11.g467647 Secondary Identifier:  ? PAC:30776056
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre11.g467647 0.5kb upstream 0.5kb upstream 4854 true chromosome_11: 829391-834244 Chlamydomonas reinhardtii
Cre11.g467647 0.5kb upstream 0.5kb upstream 500 false chromosome_11: 833745-834244 Chlamydomonas reinhardtii
Cre11.g467647 0.5kb downstream 0.5kb downstream 4854 true chromosome_11: 828891-833744 Chlamydomonas reinhardtii
Cre11.g467647 0.5kb downstream 0.5kb downstream 500 false chromosome_11: 828891-829390 Chlamydomonas reinhardtii
Cre11.g467647 1.0kb upstream 1.0kb upstream 5354 true chromosome_11: 829391-834744 Chlamydomonas reinhardtii
Cre11.g467647 1.0kb upstream 1.0kb upstream 1000 false chromosome_11: 833745-834744 Chlamydomonas reinhardtii
Cre11.g467647 1.0kb downstream 1.0kb downstream 5354 true chromosome_11: 828391-833744 Chlamydomonas reinhardtii
Cre11.g467647 1.0kb downstream 1.0kb downstream 1000 false chromosome_11: 828391-829390 Chlamydomonas reinhardtii
Cre11.g467647 2.0kb upstream 2.0kb upstream 6354 true chromosome_11: 829391-835744 Chlamydomonas reinhardtii
Cre11.g467647 2.0kb upstream 2.0kb upstream 2000 false chromosome_11: 833745-835744 Chlamydomonas reinhardtii
Cre11.g467647 2.0kb downstream 2.0kb downstream 6354 true chromosome_11: 827391-833744 Chlamydomonas reinhardtii
Cre11.g467647 2.0kb downstream 2.0kb downstream 2000 false chromosome_11: 827391-829390 Chlamydomonas reinhardtii
Cre11.g467647 5.0kb upstream 5.0kb upstream 9354 true chromosome_11: 829391-838744 Chlamydomonas reinhardtii
Cre11.g467647 5.0kb upstream 5.0kb upstream 5000 false chromosome_11: 833745-838744 Chlamydomonas reinhardtii
Cre11.g467647 5.0kb downstream 5.0kb downstream 9354 true chromosome_11: 824391-833744 Chlamydomonas reinhardtii
Cre11.g467647 5.0kb downstream 5.0kb downstream 5000 false chromosome_11: 824391-829390 Chlamydomonas reinhardtii
Cre11.g467647 10.0kb upstream 10.0kb upstream 14354 true chromosome_11: 829391-843744 Chlamydomonas reinhardtii
Cre11.g467647 10.0kb upstream 10.0kb upstream 10000 false chromosome_11: 833745-843744 Chlamydomonas reinhardtii
Cre11.g467647 10.0kb downstream 10.0kb downstream 14354 true chromosome_11: 819391-833744 Chlamydomonas reinhardtii
Cre11.g467647 10.0kb downstream 10.0kb downstream 10000 false chromosome_11: 819391-829390 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109750 5260 Chlorophyte View MSA
123424156 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.536        
cufflinks 9.892       High
cufflinks 8.478        
cufflinks 7.038        
cufflinks 9.211       High
cufflinks 8.039        
cufflinks 9.468       High
cufflinks 9.758       High
cufflinks 7.064        
cufflinks 3.466       Low
cufflinks 5.138        
cufflinks 6.785        
cufflinks 6.591        
cufflinks 8.16        
cufflinks 4.577       Low
cufflinks 7.056        
cufflinks 5.001        
cufflinks 7.272        
cufflinks 2.823       Low
cufflinks 6.3        
cufflinks 6.225        
cufflinks 4.329       Low
cufflinks 6.086        
cufflinks 7.735        
cufflinks 4.154       Low
cufflinks 8.54333 1.35369 15.733   Low
cufflinks 15.3999 4.20576 26.594   High
cufflinks 15.4664 0.0 31.0866    
cufflinks 11.6059 1.50914 21.7026    
cufflinks 11.8342 2.35542 21.313    

0 Strain