Gene : PETC C. reinhardtii v5.6
Primary Identifier:  ? Cre11.g467689 Defline:  (1 of 1) K02636 - cytochrome b6-f complex iron-sulfur subunit (petC)
Genomic Order:  164 Name:  ? Cre11.g467689
Secondary Identifier:  ? PAC:30775730
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii PHOTOALL-PWY Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-101 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-7731 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre11.g467689 0.5kb upstream 0.5kb upstream 3835 true chromosome_11: 1180685-1184519 Chlamydomonas reinhardtii
Cre11.g467689 0.5kb upstream 0.5kb upstream 500 false chromosome_11: 1180685-1181184 Chlamydomonas reinhardtii
Cre11.g467689 0.5kb downstream 0.5kb downstream 3835 true chromosome_11: 1181185-1185019 Chlamydomonas reinhardtii
Cre11.g467689 0.5kb downstream 0.5kb downstream 500 false chromosome_11: 1184520-1185019 Chlamydomonas reinhardtii
Cre11.g467689 1.0kb upstream 1.0kb upstream 4335 true chromosome_11: 1180185-1184519 Chlamydomonas reinhardtii
Cre11.g467689 1.0kb upstream 1.0kb upstream 1000 false chromosome_11: 1180185-1181184 Chlamydomonas reinhardtii
Cre11.g467689 1.0kb downstream 1.0kb downstream 4335 true chromosome_11: 1181185-1185519 Chlamydomonas reinhardtii
Cre11.g467689 1.0kb downstream 1.0kb downstream 1000 false chromosome_11: 1184520-1185519 Chlamydomonas reinhardtii
Cre11.g467689 2.0kb upstream 2.0kb upstream 5335 true chromosome_11: 1179185-1184519 Chlamydomonas reinhardtii
Cre11.g467689 2.0kb upstream 2.0kb upstream 2000 false chromosome_11: 1179185-1181184 Chlamydomonas reinhardtii
Cre11.g467689 2.0kb downstream 2.0kb downstream 5335 true chromosome_11: 1181185-1186519 Chlamydomonas reinhardtii
Cre11.g467689 2.0kb downstream 2.0kb downstream 2000 false chromosome_11: 1184520-1186519 Chlamydomonas reinhardtii
Cre11.g467689 5.0kb upstream 5.0kb upstream 8335 true chromosome_11: 1176185-1184519 Chlamydomonas reinhardtii
Cre11.g467689 5.0kb upstream 5.0kb upstream 5000 false chromosome_11: 1176185-1181184 Chlamydomonas reinhardtii
Cre11.g467689 5.0kb downstream 5.0kb downstream 8335 true chromosome_11: 1181185-1189519 Chlamydomonas reinhardtii
Cre11.g467689 5.0kb downstream 5.0kb downstream 5000 false chromosome_11: 1184520-1189519 Chlamydomonas reinhardtii
Cre11.g467689 10.0kb upstream 10.0kb upstream 13335 true chromosome_11: 1171185-1184519 Chlamydomonas reinhardtii
Cre11.g467689 10.0kb upstream 10.0kb upstream 10000 false chromosome_11: 1171185-1181184 Chlamydomonas reinhardtii
Cre11.g467689 10.0kb downstream 10.0kb downstream 13335 true chromosome_11: 1181185-1194519 Chlamydomonas reinhardtii
Cre11.g467689 10.0kb downstream 10.0kb downstream 10000 false chromosome_11: 1184520-1194519 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124108260 5260 Chlorophyte View MSA
123424591 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 911.777     High High
cufflinks 509.751     High  
cufflinks 415.444     High  
cufflinks 336.911     High  
cufflinks 444.069     High  
cufflinks 495.249     High  
cufflinks 227.092     High Low
cufflinks 376.758     High  
cufflinks 1008.86     High High
cufflinks 797.189     High High
cufflinks 189.836     High Low
cufflinks 358.853     High  
cufflinks 586.513     High  
cufflinks 439.606     High  
cufflinks 427.994     High  
cufflinks 629.348     High  
cufflinks 932.442     High High
cufflinks 514.752     High  
cufflinks 406.549     High  
cufflinks 105.138     High Low
cufflinks 522.561     High  
cufflinks 797.462     High High
cufflinks 205.922     High Low
cufflinks 301.96     High  
cufflinks 921.094     High High
cufflinks 588.924 66.2468 1111.6 High High
cufflinks 499.42 41.9293 956.911 High  
cufflinks 491.085 0.0 1046.47 High  
cufflinks 307.207 7.78738 606.626 High  
cufflinks 271.855 1.79359 541.916 High Low

0 Strain