Gene : KAS1 C. reinhardtii v5.6
Primary Identifier:  ? Cre11.g467723 Defline:  (1 of 1) PTHR11712//PTHR11712:SF226 - POLYKETIDE SYNTHASE-RELATED // 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE I, CHLOROPLASTIC
Genomic Order:  197 Name:  ? Cre11.g467723
Secondary Identifier:  ? PAC:30775833
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii FASYN-ELONG-PWY Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY3O-355 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-5156 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-5971 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-5989 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-6282 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-7388 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-7663 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre11.g467723 0.5kb upstream 0.5kb upstream 11403 true chromosome_11: 1404367-1415769 Chlamydomonas reinhardtii
Cre11.g467723 0.5kb upstream 0.5kb upstream 500 false chromosome_11: 1404367-1404866 Chlamydomonas reinhardtii
Cre11.g467723 0.5kb downstream 0.5kb downstream 11403 true chromosome_11: 1404867-1416269 Chlamydomonas reinhardtii
Cre11.g467723 0.5kb downstream 0.5kb downstream 500 false chromosome_11: 1415770-1416269 Chlamydomonas reinhardtii
Cre11.g467723 1.0kb upstream 1.0kb upstream 11903 true chromosome_11: 1403867-1415769 Chlamydomonas reinhardtii
Cre11.g467723 1.0kb upstream 1.0kb upstream 1000 false chromosome_11: 1403867-1404866 Chlamydomonas reinhardtii
Cre11.g467723 1.0kb downstream 1.0kb downstream 11903 true chromosome_11: 1404867-1416769 Chlamydomonas reinhardtii
Cre11.g467723 1.0kb downstream 1.0kb downstream 1000 false chromosome_11: 1415770-1416769 Chlamydomonas reinhardtii
Cre11.g467723 2.0kb upstream 2.0kb upstream 12903 true chromosome_11: 1402867-1415769 Chlamydomonas reinhardtii
Cre11.g467723 2.0kb upstream 2.0kb upstream 2000 false chromosome_11: 1402867-1404866 Chlamydomonas reinhardtii
Cre11.g467723 2.0kb downstream 2.0kb downstream 12903 true chromosome_11: 1404867-1417769 Chlamydomonas reinhardtii
Cre11.g467723 2.0kb downstream 2.0kb downstream 2000 false chromosome_11: 1415770-1417769 Chlamydomonas reinhardtii
Cre11.g467723 5.0kb upstream 5.0kb upstream 15903 true chromosome_11: 1399867-1415769 Chlamydomonas reinhardtii
Cre11.g467723 5.0kb upstream 5.0kb upstream 5000 false chromosome_11: 1399867-1404866 Chlamydomonas reinhardtii
Cre11.g467723 5.0kb downstream 5.0kb downstream 15903 true chromosome_11: 1404867-1420769 Chlamydomonas reinhardtii
Cre11.g467723 5.0kb downstream 5.0kb downstream 5000 false chromosome_11: 1415770-1420769 Chlamydomonas reinhardtii
Cre11.g467723 10.0kb upstream 10.0kb upstream 20903 true chromosome_11: 1394867-1415769 Chlamydomonas reinhardtii
Cre11.g467723 10.0kb upstream 10.0kb upstream 10000 false chromosome_11: 1394867-1404866 Chlamydomonas reinhardtii
Cre11.g467723 10.0kb downstream 10.0kb downstream 20903 true chromosome_11: 1404867-1425769 Chlamydomonas reinhardtii
Cre11.g467723 10.0kb downstream 10.0kb downstream 10000 false chromosome_11: 1415770-1425769 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124108345 5260 Chlorophyte View MSA
123426303 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.893     High High
cufflinks 19.246     High  
cufflinks 13.248        
cufflinks 15.432        
cufflinks 18.741     High  
cufflinks 16.289     High  
cufflinks 3.496       Low
cufflinks 14.059        
cufflinks 33.887     High High
cufflinks 9.437     High  
cufflinks 12.8        
cufflinks 13.601        
cufflinks 10.743     High  
cufflinks 18.221     High  
cufflinks 11.627        
cufflinks 30.761     High High
cufflinks 30.344     High High
cufflinks 16.895     High  
cufflinks 2.046       Low
cufflinks 6.972       Low
cufflinks 13.589     High  
cufflinks 25.806     High  
cufflinks 5.503       Low
cufflinks 15.459     High  
cufflinks 30.89     High High
cufflinks 105.853 0.0 236.757 High High
cufflinks 135.598 14.6706 256.525 High  
cufflinks 26.6125 0.0 56.6802 High  
cufflinks 83.2699 0.0 186.99 High  
cufflinks 111.538 0.909574 222.167 High  

0 Strain