Gene : CPLD65 C. reinhardtii v5.6
Primary Identifier:  ? Cre11.g468700 Defline:  (1 of 1) 1.17.7.2 - 7-hydroxymethyl chlorophyll a reductase
Genomic Order:  310 Name:  ? Cre11.g468700
Secondary Identifier:  ? PAC:30775992
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii PWY-5068 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre11.g468700 0.5kb upstream 0.5kb upstream 7336 true chromosome_11: 2057590-2064925 Chlamydomonas reinhardtii
Cre11.g468700 0.5kb upstream 0.5kb upstream 500 false chromosome_11: 2064426-2064925 Chlamydomonas reinhardtii
Cre11.g468700 0.5kb downstream 0.5kb downstream 7336 true chromosome_11: 2057090-2064425 Chlamydomonas reinhardtii
Cre11.g468700 0.5kb downstream 0.5kb downstream 500 false chromosome_11: 2057090-2057589 Chlamydomonas reinhardtii
Cre11.g468700 1.0kb upstream 1.0kb upstream 7836 true chromosome_11: 2057590-2065425 Chlamydomonas reinhardtii
Cre11.g468700 1.0kb upstream 1.0kb upstream 1000 false chromosome_11: 2064426-2065425 Chlamydomonas reinhardtii
Cre11.g468700 1.0kb downstream 1.0kb downstream 7836 true chromosome_11: 2056590-2064425 Chlamydomonas reinhardtii
Cre11.g468700 1.0kb downstream 1.0kb downstream 1000 false chromosome_11: 2056590-2057589 Chlamydomonas reinhardtii
Cre11.g468700 2.0kb upstream 2.0kb upstream 8836 true chromosome_11: 2057590-2066425 Chlamydomonas reinhardtii
Cre11.g468700 2.0kb upstream 2.0kb upstream 2000 false chromosome_11: 2064426-2066425 Chlamydomonas reinhardtii
Cre11.g468700 2.0kb downstream 2.0kb downstream 8836 true chromosome_11: 2055590-2064425 Chlamydomonas reinhardtii
Cre11.g468700 2.0kb downstream 2.0kb downstream 2000 false chromosome_11: 2055590-2057589 Chlamydomonas reinhardtii
Cre11.g468700 5.0kb upstream 5.0kb upstream 11836 true chromosome_11: 2057590-2069425 Chlamydomonas reinhardtii
Cre11.g468700 5.0kb upstream 5.0kb upstream 5000 false chromosome_11: 2064426-2069425 Chlamydomonas reinhardtii
Cre11.g468700 5.0kb downstream 5.0kb downstream 11836 true chromosome_11: 2052590-2064425 Chlamydomonas reinhardtii
Cre11.g468700 5.0kb downstream 5.0kb downstream 5000 false chromosome_11: 2052590-2057589 Chlamydomonas reinhardtii
Cre11.g468700 10.0kb upstream 10.0kb upstream 16836 true chromosome_11: 2057590-2074425 Chlamydomonas reinhardtii
Cre11.g468700 10.0kb upstream 10.0kb upstream 10000 false chromosome_11: 2064426-2074425 Chlamydomonas reinhardtii
Cre11.g468700 10.0kb downstream 10.0kb downstream 16836 true chromosome_11: 2047590-2064425 Chlamydomonas reinhardtii
Cre11.g468700 10.0kb downstream 10.0kb downstream 10000 false chromosome_11: 2047590-2057589 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124108789 5260 Chlorophyte View MSA
123428400 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.309        
cufflinks 1.214        
cufflinks 1.047        
cufflinks 1.475        
cufflinks 1.254        
cufflinks 0.995        
cufflinks 0.972        
cufflinks 1.713        
cufflinks 1.607        
cufflinks 0.42       Low
cufflinks 1.547        
cufflinks 1.658        
cufflinks 0.859        
cufflinks 1.131        
cufflinks 1.526        
cufflinks 1.581        
cufflinks 2.668       High
cufflinks 0.968        
cufflinks 0.313       Low
cufflinks 1.1        
cufflinks 1.568        
cufflinks 2.682       High
cufflinks 0.785        
cufflinks 1.822        
cufflinks 2.731       High
cufflinks 0.920766 0.0 1.88446   Low
cufflinks 3.80098 0.315387 7.28658    
cufflinks 4.76935 0.0 9.97838    
cufflinks 3.4493 0.466122 6.43249   High
cufflinks 6.26106 1.15322 11.3689    

0 Strain