Gene : Cre11.g468400 C. reinhardtii v5.6
Defline:  (1 of 5) PF07466 - Protein of unknown function (DUF1517) (DUF1517) Genomic Order:  304
Name:  ? Cre11.g468400 Secondary Identifier:  ? PAC:30775972
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre11.g468400 0.5kb upstream 0.5kb upstream 5965 true chromosome_11: 2030831-2036795 Chlamydomonas reinhardtii
Cre11.g468400 0.5kb upstream 0.5kb upstream 500 false chromosome_11: 2036296-2036795 Chlamydomonas reinhardtii
Cre11.g468400 0.5kb downstream 0.5kb downstream 5965 true chromosome_11: 2030331-2036295 Chlamydomonas reinhardtii
Cre11.g468400 0.5kb downstream 0.5kb downstream 500 false chromosome_11: 2030331-2030830 Chlamydomonas reinhardtii
Cre11.g468400 1.0kb upstream 1.0kb upstream 6465 true chromosome_11: 2030831-2037295 Chlamydomonas reinhardtii
Cre11.g468400 1.0kb upstream 1.0kb upstream 1000 false chromosome_11: 2036296-2037295 Chlamydomonas reinhardtii
Cre11.g468400 1.0kb downstream 1.0kb downstream 6465 true chromosome_11: 2029831-2036295 Chlamydomonas reinhardtii
Cre11.g468400 1.0kb downstream 1.0kb downstream 1000 false chromosome_11: 2029831-2030830 Chlamydomonas reinhardtii
Cre11.g468400 2.0kb upstream 2.0kb upstream 7465 true chromosome_11: 2030831-2038295 Chlamydomonas reinhardtii
Cre11.g468400 2.0kb upstream 2.0kb upstream 2000 false chromosome_11: 2036296-2038295 Chlamydomonas reinhardtii
Cre11.g468400 2.0kb downstream 2.0kb downstream 7465 true chromosome_11: 2028831-2036295 Chlamydomonas reinhardtii
Cre11.g468400 2.0kb downstream 2.0kb downstream 2000 false chromosome_11: 2028831-2030830 Chlamydomonas reinhardtii
Cre11.g468400 5.0kb upstream 5.0kb upstream 10465 true chromosome_11: 2030831-2041295 Chlamydomonas reinhardtii
Cre11.g468400 5.0kb upstream 5.0kb upstream 5000 false chromosome_11: 2036296-2041295 Chlamydomonas reinhardtii
Cre11.g468400 5.0kb downstream 5.0kb downstream 10465 true chromosome_11: 2025831-2036295 Chlamydomonas reinhardtii
Cre11.g468400 5.0kb downstream 5.0kb downstream 5000 false chromosome_11: 2025831-2030830 Chlamydomonas reinhardtii
Cre11.g468400 10.0kb upstream 10.0kb upstream 15465 true chromosome_11: 2030831-2046295 Chlamydomonas reinhardtii
Cre11.g468400 10.0kb upstream 10.0kb upstream 10000 false chromosome_11: 2036296-2046295 Chlamydomonas reinhardtii
Cre11.g468400 10.0kb downstream 10.0kb downstream 15465 true chromosome_11: 2020831-2036295 Chlamydomonas reinhardtii
Cre11.g468400 10.0kb downstream 10.0kb downstream 10000 false chromosome_11: 2020831-2030830 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124113249 5260 Chlorophyte View MSA
123429152 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.396        
cufflinks 3.137        
cufflinks 11.755       High
cufflinks 11.879       High
cufflinks 3.857        
cufflinks 4.26        
cufflinks 4.323        
cufflinks 6.961        
cufflinks 2.869        
cufflinks 2.719        
cufflinks 8.646       High
cufflinks 5.495        
cufflinks 4.914        
cufflinks 4.44        
cufflinks 6.046        
cufflinks 3.463        
cufflinks 6.024        
cufflinks 8.102       High
cufflinks 1.177       Low
cufflinks 4.647        
cufflinks 5.836        
cufflinks 3.155        
cufflinks 2.237       Low
cufflinks 8.232       High
cufflinks 2.317       Low
cufflinks 0.253826 0.0 0.567729   Low
cufflinks 3.66854 0.596587 6.74049    
cufflinks 3.82713 0.0 8.12344    
cufflinks 7.24227 1.17468 13.3099    
cufflinks 14.9654 2.79246 27.1384    

0 Strain