Gene : Cre12.g505700 C. reinhardtii v5.6
Defline:  (1 of 1) K03120 - transcription initiation factor TFIID TATA-box-binding protein (TBP, tbp) Genomic Order:  442
Name:  ? Cre12.g505700 Secondary Identifier:  ? PAC:30791964
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g505700 0.5kb upstream 0.5kb upstream 3545 true chromosome_12: 2546243-2549787 Chlamydomonas reinhardtii
Cre12.g505700 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 2546243-2546742 Chlamydomonas reinhardtii
Cre12.g505700 0.5kb downstream 0.5kb downstream 3545 true chromosome_12: 2546743-2550287 Chlamydomonas reinhardtii
Cre12.g505700 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 2549788-2550287 Chlamydomonas reinhardtii
Cre12.g505700 1.0kb upstream 1.0kb upstream 4045 true chromosome_12: 2545743-2549787 Chlamydomonas reinhardtii
Cre12.g505700 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 2545743-2546742 Chlamydomonas reinhardtii
Cre12.g505700 1.0kb downstream 1.0kb downstream 4045 true chromosome_12: 2546743-2550787 Chlamydomonas reinhardtii
Cre12.g505700 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 2549788-2550787 Chlamydomonas reinhardtii
Cre12.g505700 2.0kb upstream 2.0kb upstream 5045 true chromosome_12: 2544743-2549787 Chlamydomonas reinhardtii
Cre12.g505700 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 2544743-2546742 Chlamydomonas reinhardtii
Cre12.g505700 2.0kb downstream 2.0kb downstream 5045 true chromosome_12: 2546743-2551787 Chlamydomonas reinhardtii
Cre12.g505700 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 2549788-2551787 Chlamydomonas reinhardtii
Cre12.g505700 5.0kb upstream 5.0kb upstream 8045 true chromosome_12: 2541743-2549787 Chlamydomonas reinhardtii
Cre12.g505700 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 2541743-2546742 Chlamydomonas reinhardtii
Cre12.g505700 5.0kb downstream 5.0kb downstream 8045 true chromosome_12: 2546743-2554787 Chlamydomonas reinhardtii
Cre12.g505700 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 2549788-2554787 Chlamydomonas reinhardtii
Cre12.g505700 10.0kb upstream 10.0kb upstream 13045 true chromosome_12: 2536743-2549787 Chlamydomonas reinhardtii
Cre12.g505700 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 2536743-2546742 Chlamydomonas reinhardtii
Cre12.g505700 10.0kb downstream 10.0kb downstream 13045 true chromosome_12: 2546743-2559787 Chlamydomonas reinhardtii
Cre12.g505700 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 2549788-2559787 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124108725 5260 Chlorophyte View MSA
123429185 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.298     High  
cufflinks 13.004        
cufflinks 11.234        
cufflinks 12.401        
cufflinks 14.017     High  
cufflinks 12.928     High  
cufflinks 13.897     High  
cufflinks 16.009     High High
cufflinks 9.092       Low
cufflinks 6.062       Low
cufflinks 10.659        
cufflinks 15.244     High  
cufflinks 12.162     High  
cufflinks 12.577        
cufflinks 11.509        
cufflinks 12.376     High  
cufflinks 14.727     High  
cufflinks 10.737        
cufflinks 5.646     High Low
cufflinks 20.091     High High
cufflinks 13.126     High  
cufflinks 12.755     High  
cufflinks 12.943     High  
cufflinks 14.475        
cufflinks 13.436     High  
cufflinks 47.1469 0.0 94.4416 High High
cufflinks 18.6841 5.10258 32.2656    
cufflinks 23.7118 0.0 47.8036    
cufflinks 19.9421 1.70868 38.1755    
cufflinks 18.0956 3.48229 32.709   Low

0 Strain