Gene : Cre12.g512300 C. reinhardtii v5.6
Defline:  (1 of 1) 1.13.11.12//1.13.11.58 - Linoleate 13S-lipoxygenase / Lipoxidase // Linoleate 9S-lipoxygenase / Linoleate 9-lipoxygenase Genomic Order:  292
Name:  ? Cre12.g512300 Secondary Identifier:  ? PAC:30791835
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii PWY-5409 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-735 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g512300 0.5kb upstream 0.5kb upstream 9020 true chromosome_12: 1768951-1777970 Chlamydomonas reinhardtii
Cre12.g512300 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 1777471-1777970 Chlamydomonas reinhardtii
Cre12.g512300 0.5kb downstream 0.5kb downstream 9020 true chromosome_12: 1768451-1777470 Chlamydomonas reinhardtii
Cre12.g512300 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 1768451-1768950 Chlamydomonas reinhardtii
Cre12.g512300 1.0kb upstream 1.0kb upstream 9520 true chromosome_12: 1768951-1778470 Chlamydomonas reinhardtii
Cre12.g512300 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 1777471-1778470 Chlamydomonas reinhardtii
Cre12.g512300 1.0kb downstream 1.0kb downstream 9520 true chromosome_12: 1767951-1777470 Chlamydomonas reinhardtii
Cre12.g512300 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 1767951-1768950 Chlamydomonas reinhardtii
Cre12.g512300 2.0kb upstream 2.0kb upstream 10520 true chromosome_12: 1768951-1779470 Chlamydomonas reinhardtii
Cre12.g512300 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 1777471-1779470 Chlamydomonas reinhardtii
Cre12.g512300 2.0kb downstream 2.0kb downstream 10520 true chromosome_12: 1766951-1777470 Chlamydomonas reinhardtii
Cre12.g512300 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 1766951-1768950 Chlamydomonas reinhardtii
Cre12.g512300 5.0kb upstream 5.0kb upstream 13520 true chromosome_12: 1768951-1782470 Chlamydomonas reinhardtii
Cre12.g512300 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 1777471-1782470 Chlamydomonas reinhardtii
Cre12.g512300 5.0kb downstream 5.0kb downstream 13520 true chromosome_12: 1763951-1777470 Chlamydomonas reinhardtii
Cre12.g512300 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 1763951-1768950 Chlamydomonas reinhardtii
Cre12.g512300 10.0kb upstream 10.0kb upstream 18520 true chromosome_12: 1768951-1787470 Chlamydomonas reinhardtii
Cre12.g512300 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 1777471-1787470 Chlamydomonas reinhardtii
Cre12.g512300 10.0kb downstream 10.0kb downstream 18520 true chromosome_12: 1758951-1777470 Chlamydomonas reinhardtii
Cre12.g512300 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 1758951-1768950 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111336 5260 Chlorophyte View MSA
123429188 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.814     High  
cufflinks 49.749     High  
cufflinks 19.311     High  
cufflinks 30.685     High  
cufflinks 25.567     High  
cufflinks 24.498     High  
cufflinks 15.777     High  
cufflinks 25.857     High  
cufflinks 29.333     High  
cufflinks 2.015       Low
cufflinks 37.461     High  
cufflinks 57.68     High High
cufflinks 10.503     High  
cufflinks 44.826     High  
cufflinks 38.261     High  
cufflinks 9.201        
cufflinks 56.927     High High
cufflinks 29.419     High  
cufflinks 3.227       Low
cufflinks 1.528       Low
cufflinks 32.58     High  
cufflinks 39.097     High  
cufflinks 5.975       Low
cufflinks 26.065     High  
cufflinks 42.665     High  
cufflinks 0.278707 0.0 0.598651 Low  
cufflinks 26.5017 6.87053 46.1329    
cufflinks 0.671099 0.0 1.73599    
cufflinks 0.276328 0.0 0.595054    
cufflinks 4.32719 0.792756 7.86163    

0 Strain