Gene : TOPBP1 C. reinhardtii v5.6
Primary Identifier:  ? Cre12.g515900 Defline:  (1 of 1) KOG1929 - Nucleotide excision repair factor NEF2, RAD4/CUT5 component
Genomic Order:  710 Name:  ? Cre12.g515900
Secondary Identifier:  ? PAC:30792044
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g515900 0.5kb upstream 0.5kb upstream 6179 true chromosome_12: 3896225-3902403 Chlamydomonas reinhardtii
Cre12.g515900 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 3901904-3902403 Chlamydomonas reinhardtii
Cre12.g515900 0.5kb downstream 0.5kb downstream 6179 true chromosome_12: 3895725-3901903 Chlamydomonas reinhardtii
Cre12.g515900 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 3895725-3896224 Chlamydomonas reinhardtii
Cre12.g515900 1.0kb upstream 1.0kb upstream 6679 true chromosome_12: 3896225-3902903 Chlamydomonas reinhardtii
Cre12.g515900 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 3901904-3902903 Chlamydomonas reinhardtii
Cre12.g515900 1.0kb downstream 1.0kb downstream 6679 true chromosome_12: 3895225-3901903 Chlamydomonas reinhardtii
Cre12.g515900 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 3895225-3896224 Chlamydomonas reinhardtii
Cre12.g515900 2.0kb upstream 2.0kb upstream 7679 true chromosome_12: 3896225-3903903 Chlamydomonas reinhardtii
Cre12.g515900 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 3901904-3903903 Chlamydomonas reinhardtii
Cre12.g515900 2.0kb downstream 2.0kb downstream 7679 true chromosome_12: 3894225-3901903 Chlamydomonas reinhardtii
Cre12.g515900 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 3894225-3896224 Chlamydomonas reinhardtii
Cre12.g515900 5.0kb upstream 5.0kb upstream 10679 true chromosome_12: 3896225-3906903 Chlamydomonas reinhardtii
Cre12.g515900 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 3901904-3906903 Chlamydomonas reinhardtii
Cre12.g515900 5.0kb downstream 5.0kb downstream 10679 true chromosome_12: 3891225-3901903 Chlamydomonas reinhardtii
Cre12.g515900 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 3891225-3896224 Chlamydomonas reinhardtii
Cre12.g515900 10.0kb upstream 10.0kb upstream 15679 true chromosome_12: 3896225-3911903 Chlamydomonas reinhardtii
Cre12.g515900 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 3901904-3911903 Chlamydomonas reinhardtii
Cre12.g515900 10.0kb downstream 10.0kb downstream 15679 true chromosome_12: 3886225-3901903 Chlamydomonas reinhardtii
Cre12.g515900 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 3886225-3896224 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110200 5260 Chlorophyte View MSA
123425629 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.165       Low
cufflinks 1.351        
cufflinks 0.952        
cufflinks 0.953        
cufflinks 0.825        
cufflinks 0.879        
cufflinks 2.113       High
cufflinks 1.458       High
cufflinks 0.352       Low
cufflinks 0.196       Low
cufflinks 0.73        
cufflinks 1.043        
cufflinks 0.502        
cufflinks 0.613        
cufflinks 0.988        
cufflinks 0.234       Low
cufflinks 0.347       Low
cufflinks 0.798        
cufflinks 0.459        
cufflinks 1.393        
cufflinks 0.766        
cufflinks 0.48        
cufflinks 2.458       High
cufflinks 1.023        
cufflinks 0.827        
cufflinks 0.587666 0.0 1.19998   Low
cufflinks 2.5591 0.24821 4.86998    
cufflinks 5.43783 0.0 11.0411   High
cufflinks 2.62622 0.4022 4.85025   High
cufflinks 2.75331 0.369912 5.1367    

0 Strain