Gene : GTR16 C. reinhardtii v5.6
Primary Identifier:  ? Cre12.g516550 Defline:  (1 of 1) 2.4.1.142 - Chitobiosyldiphosphodolichol beta-mannosyltransferase / mannosyltransferase
Genomic Order:  725 Name:  ? Cre12.g516550
Secondary Identifier:  ? PAC:30792266
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g516550 0.5kb upstream 0.5kb upstream 2412 true chromosome_12: 3963294-3965705 Chlamydomonas reinhardtii
Cre12.g516550 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 3963294-3963793 Chlamydomonas reinhardtii
Cre12.g516550 0.5kb downstream 0.5kb downstream 2412 true chromosome_12: 3963794-3966205 Chlamydomonas reinhardtii
Cre12.g516550 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 3965706-3966205 Chlamydomonas reinhardtii
Cre12.g516550 1.0kb upstream 1.0kb upstream 2912 true chromosome_12: 3962794-3965705 Chlamydomonas reinhardtii
Cre12.g516550 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 3962794-3963793 Chlamydomonas reinhardtii
Cre12.g516550 1.0kb downstream 1.0kb downstream 2912 true chromosome_12: 3963794-3966705 Chlamydomonas reinhardtii
Cre12.g516550 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 3965706-3966705 Chlamydomonas reinhardtii
Cre12.g516550 2.0kb upstream 2.0kb upstream 3912 true chromosome_12: 3961794-3965705 Chlamydomonas reinhardtii
Cre12.g516550 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 3961794-3963793 Chlamydomonas reinhardtii
Cre12.g516550 2.0kb downstream 2.0kb downstream 3912 true chromosome_12: 3963794-3967705 Chlamydomonas reinhardtii
Cre12.g516550 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 3965706-3967705 Chlamydomonas reinhardtii
Cre12.g516550 5.0kb upstream 5.0kb upstream 6912 true chromosome_12: 3958794-3965705 Chlamydomonas reinhardtii
Cre12.g516550 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 3958794-3963793 Chlamydomonas reinhardtii
Cre12.g516550 5.0kb downstream 5.0kb downstream 6912 true chromosome_12: 3963794-3970705 Chlamydomonas reinhardtii
Cre12.g516550 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 3965706-3970705 Chlamydomonas reinhardtii
Cre12.g516550 10.0kb upstream 10.0kb upstream 11912 true chromosome_12: 3953794-3965705 Chlamydomonas reinhardtii
Cre12.g516550 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 3953794-3963793 Chlamydomonas reinhardtii
Cre12.g516550 10.0kb downstream 10.0kb downstream 11912 true chromosome_12: 3963794-3975705 Chlamydomonas reinhardtii
Cre12.g516550 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 3965706-3975705 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109731 5260 Chlorophyte View MSA
123429023 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.617        
cufflinks 5.016        
cufflinks 4.597        
cufflinks 5.194        
cufflinks 4.359        
cufflinks 4.372        
cufflinks 4.335        
cufflinks 6.701       High
cufflinks 4.116        
cufflinks 2.706       Low
cufflinks 3.671       Low
cufflinks 5.029        
cufflinks 4.553        
cufflinks 3.942        
cufflinks 4.658        
cufflinks 4.543        
cufflinks 3.586       Low
cufflinks 4.511        
cufflinks 3.078       Low
cufflinks 5.477       High
cufflinks 4.207        
cufflinks 4.704        
cufflinks 4.249        
cufflinks 6.162       High
cufflinks 5.102        
cufflinks 2.98352 0.237579 5.72946   High
cufflinks 3.70199 0.0470874 7.3569    
cufflinks 7.76441 0.0 16.1568   High
cufflinks 3.19892 0.282712 6.11513   High
cufflinks 5.61058 0.737387 10.4838    

0 Strain