Gene : ARC6 C. reinhardtii v5.6
Primary Identifier:  ? Cre12.g488500 Defline:  (1 of 2) PTHR33925//PTHR33925:SF3 - FAMILY NOT NAMED // PROTEIN ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, CHLOROPLASTIC
Genomic Order:  212 Name:  ? Cre12.g488500
Secondary Identifier:  ? PAC:30793118
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g488500 0.5kb upstream 0.5kb upstream 5316 true chromosome_12: 1354239-1359554 Chlamydomonas reinhardtii
Cre12.g488500 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 1359055-1359554 Chlamydomonas reinhardtii
Cre12.g488500 0.5kb downstream 0.5kb downstream 5316 true chromosome_12: 1353739-1359054 Chlamydomonas reinhardtii
Cre12.g488500 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 1353739-1354238 Chlamydomonas reinhardtii
Cre12.g488500 1.0kb upstream 1.0kb upstream 5816 true chromosome_12: 1354239-1360054 Chlamydomonas reinhardtii
Cre12.g488500 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 1359055-1360054 Chlamydomonas reinhardtii
Cre12.g488500 1.0kb downstream 1.0kb downstream 5816 true chromosome_12: 1353239-1359054 Chlamydomonas reinhardtii
Cre12.g488500 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 1353239-1354238 Chlamydomonas reinhardtii
Cre12.g488500 2.0kb upstream 2.0kb upstream 6816 true chromosome_12: 1354239-1361054 Chlamydomonas reinhardtii
Cre12.g488500 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 1359055-1361054 Chlamydomonas reinhardtii
Cre12.g488500 2.0kb downstream 2.0kb downstream 6816 true chromosome_12: 1352239-1359054 Chlamydomonas reinhardtii
Cre12.g488500 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 1352239-1354238 Chlamydomonas reinhardtii
Cre12.g488500 5.0kb upstream 5.0kb upstream 9816 true chromosome_12: 1354239-1364054 Chlamydomonas reinhardtii
Cre12.g488500 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 1359055-1364054 Chlamydomonas reinhardtii
Cre12.g488500 5.0kb downstream 5.0kb downstream 9816 true chromosome_12: 1349239-1359054 Chlamydomonas reinhardtii
Cre12.g488500 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 1349239-1354238 Chlamydomonas reinhardtii
Cre12.g488500 10.0kb upstream 10.0kb upstream 14816 true chromosome_12: 1354239-1369054 Chlamydomonas reinhardtii
Cre12.g488500 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 1359055-1369054 Chlamydomonas reinhardtii
Cre12.g488500 10.0kb downstream 10.0kb downstream 14816 true chromosome_12: 1344239-1359054 Chlamydomonas reinhardtii
Cre12.g488500 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 1344239-1354238 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112223 5260 Chlorophyte View MSA
123426631 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.779        
cufflinks 1.8        
cufflinks 1.275        
cufflinks 0.668        
cufflinks 0.974        
cufflinks 1.254        
cufflinks 1.652        
cufflinks 0.003     Low Low
cufflinks 0.089        
cufflinks 0.754        
cufflinks 1.436        
cufflinks 0.519        
cufflinks 0.678        
cufflinks 0.995        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.846        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.111     Low  
cufflinks 0.204        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.732       High
cufflinks 0.768        
cufflinks 0.003     Low Low
cufflinks 1.27028 0.0337702 2.50679   Low
cufflinks 3.17988 0.0404464 6.31932    
cufflinks 5.20103 0.0 10.903    
cufflinks 4.47958 0.740504 8.21865    
cufflinks 4.40702 0.620375 8.19368    

0 Strain