Gene : Cre12.g487400 C. reinhardtii v5.6
Defline:  (1 of 3) PTHR12281 - RP42 RELATED Genomic Order:  237
Name:  ? Cre12.g487400 Secondary Identifier:  ? PAC:30792546
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g487400 0.5kb upstream 0.5kb upstream 3696 true chromosome_12: 1491245-1494940 Chlamydomonas reinhardtii
Cre12.g487400 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 1491245-1491744 Chlamydomonas reinhardtii
Cre12.g487400 0.5kb downstream 0.5kb downstream 3696 true chromosome_12: 1491745-1495440 Chlamydomonas reinhardtii
Cre12.g487400 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 1494941-1495440 Chlamydomonas reinhardtii
Cre12.g487400 1.0kb upstream 1.0kb upstream 4196 true chromosome_12: 1490745-1494940 Chlamydomonas reinhardtii
Cre12.g487400 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 1490745-1491744 Chlamydomonas reinhardtii
Cre12.g487400 1.0kb downstream 1.0kb downstream 4196 true chromosome_12: 1491745-1495940 Chlamydomonas reinhardtii
Cre12.g487400 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 1494941-1495940 Chlamydomonas reinhardtii
Cre12.g487400 2.0kb upstream 2.0kb upstream 5196 true chromosome_12: 1489745-1494940 Chlamydomonas reinhardtii
Cre12.g487400 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 1489745-1491744 Chlamydomonas reinhardtii
Cre12.g487400 2.0kb downstream 2.0kb downstream 5196 true chromosome_12: 1491745-1496940 Chlamydomonas reinhardtii
Cre12.g487400 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 1494941-1496940 Chlamydomonas reinhardtii
Cre12.g487400 5.0kb upstream 5.0kb upstream 8196 true chromosome_12: 1486745-1494940 Chlamydomonas reinhardtii
Cre12.g487400 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 1486745-1491744 Chlamydomonas reinhardtii
Cre12.g487400 5.0kb downstream 5.0kb downstream 8196 true chromosome_12: 1491745-1499940 Chlamydomonas reinhardtii
Cre12.g487400 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 1494941-1499940 Chlamydomonas reinhardtii
Cre12.g487400 10.0kb upstream 10.0kb upstream 13196 true chromosome_12: 1481745-1494940 Chlamydomonas reinhardtii
Cre12.g487400 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 1481745-1491744 Chlamydomonas reinhardtii
Cre12.g487400 10.0kb downstream 10.0kb downstream 13196 true chromosome_12: 1491745-1504940 Chlamydomonas reinhardtii
Cre12.g487400 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 1494941-1504940 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112518 5260 Chlorophyte View MSA
123426015 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.212     High  
cufflinks 17.356     High High
cufflinks 11.131        
cufflinks 11.044        
cufflinks 17.019     High High
cufflinks 15.22     High  
cufflinks 14.254     High  
cufflinks 12.816        
cufflinks 14.761     High  
cufflinks 6.452       Low
cufflinks 6.684       Low
cufflinks 13.867        
cufflinks 11.083     High  
cufflinks 15.663     High  
cufflinks 10.357        
cufflinks 20.523     High High
cufflinks 11.547        
cufflinks 12.285        
cufflinks 2.903       Low
cufflinks 7.415       Low
cufflinks 10.243        
cufflinks 11.111        
cufflinks 9.244        
cufflinks 11.288        
cufflinks 10.783        
cufflinks 25.4399 1.32976 49.55    
cufflinks 15.9955 4.36084 27.6301    
cufflinks 9.67353 0.0 19.4715    
cufflinks 7.66356 1.22855 14.0986   Low
cufflinks 11.0378 2.21429 19.8613   High

0 Strain