Gene : Cre12.g487450 C. reinhardtii v5.6
Defline:  (1 of 1) PF08910 - Aida N-terminus (Aida_N) Genomic Order:  236
Name:  ? Cre12.g487450 Secondary Identifier:  ? PAC:30792111
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g487450 0.5kb upstream 0.5kb upstream 3759 true chromosome_12: 1488356-1492114 Chlamydomonas reinhardtii
Cre12.g487450 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 1491615-1492114 Chlamydomonas reinhardtii
Cre12.g487450 0.5kb downstream 0.5kb downstream 3759 true chromosome_12: 1487856-1491614 Chlamydomonas reinhardtii
Cre12.g487450 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 1487856-1488355 Chlamydomonas reinhardtii
Cre12.g487450 1.0kb upstream 1.0kb upstream 4259 true chromosome_12: 1488356-1492614 Chlamydomonas reinhardtii
Cre12.g487450 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 1491615-1492614 Chlamydomonas reinhardtii
Cre12.g487450 1.0kb downstream 1.0kb downstream 4259 true chromosome_12: 1487356-1491614 Chlamydomonas reinhardtii
Cre12.g487450 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 1487356-1488355 Chlamydomonas reinhardtii
Cre12.g487450 2.0kb upstream 2.0kb upstream 5259 true chromosome_12: 1488356-1493614 Chlamydomonas reinhardtii
Cre12.g487450 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 1491615-1493614 Chlamydomonas reinhardtii
Cre12.g487450 2.0kb downstream 2.0kb downstream 5259 true chromosome_12: 1486356-1491614 Chlamydomonas reinhardtii
Cre12.g487450 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 1486356-1488355 Chlamydomonas reinhardtii
Cre12.g487450 5.0kb upstream 5.0kb upstream 8259 true chromosome_12: 1488356-1496614 Chlamydomonas reinhardtii
Cre12.g487450 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 1491615-1496614 Chlamydomonas reinhardtii
Cre12.g487450 5.0kb downstream 5.0kb downstream 8259 true chromosome_12: 1483356-1491614 Chlamydomonas reinhardtii
Cre12.g487450 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 1483356-1488355 Chlamydomonas reinhardtii
Cre12.g487450 10.0kb upstream 10.0kb upstream 13259 true chromosome_12: 1488356-1501614 Chlamydomonas reinhardtii
Cre12.g487450 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 1491615-1501614 Chlamydomonas reinhardtii
Cre12.g487450 10.0kb downstream 10.0kb downstream 13259 true chromosome_12: 1478356-1491614 Chlamydomonas reinhardtii
Cre12.g487450 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 1478356-1488355 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110730 5260 Chlorophyte View MSA
123423125 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.514        
cufflinks 7.565        
cufflinks 9.216        
cufflinks 9.424       High
cufflinks 5.544        
cufflinks 6.345        
cufflinks 7.915        
cufflinks 8.16        
cufflinks 5.245        
cufflinks 2.239       Low
cufflinks 8.033        
cufflinks 8.847        
cufflinks 4.09       Low
cufflinks 7.234        
cufflinks 6.989        
cufflinks 6.631        
cufflinks 6.357        
cufflinks 5.776        
cufflinks 2.505       Low
cufflinks 8.835        
cufflinks 5.595        
cufflinks 5.367        
cufflinks 12.721       High
cufflinks 6.643        
cufflinks 6.215        
cufflinks 5.7811 0.980933 10.5813   High
cufflinks 5.03681 0.971271 9.10235    
cufflinks 4.72687 0.0 9.78217    
cufflinks 4.63641 0.774135 8.49868    
cufflinks 8.8713 1.77431 15.9683   High

0 Strain