Gene : Cre12.g492503 C. reinhardtii v5.6
Genomic Order:  99 Name:  ? Cre12.g492503
Secondary Identifier:  ? PAC:30793422
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g492503 0.5kb upstream 0.5kb upstream 2168 true chromosome_12: 600947-603114 Chlamydomonas reinhardtii
Cre12.g492503 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 600947-601446 Chlamydomonas reinhardtii
Cre12.g492503 0.5kb downstream 0.5kb downstream 2168 true chromosome_12: 601447-603614 Chlamydomonas reinhardtii
Cre12.g492503 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 603115-603614 Chlamydomonas reinhardtii
Cre12.g492503 1.0kb upstream 1.0kb upstream 2668 true chromosome_12: 600447-603114 Chlamydomonas reinhardtii
Cre12.g492503 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 600447-601446 Chlamydomonas reinhardtii
Cre12.g492503 1.0kb downstream 1.0kb downstream 2668 true chromosome_12: 601447-604114 Chlamydomonas reinhardtii
Cre12.g492503 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 603115-604114 Chlamydomonas reinhardtii
Cre12.g492503 2.0kb upstream 2.0kb upstream 3668 true chromosome_12: 599447-603114 Chlamydomonas reinhardtii
Cre12.g492503 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 599447-601446 Chlamydomonas reinhardtii
Cre12.g492503 2.0kb downstream 2.0kb downstream 3668 true chromosome_12: 601447-605114 Chlamydomonas reinhardtii
Cre12.g492503 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 603115-605114 Chlamydomonas reinhardtii
Cre12.g492503 5.0kb upstream 5.0kb upstream 6668 true chromosome_12: 596447-603114 Chlamydomonas reinhardtii
Cre12.g492503 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 596447-601446 Chlamydomonas reinhardtii
Cre12.g492503 5.0kb downstream 5.0kb downstream 6668 true chromosome_12: 601447-608114 Chlamydomonas reinhardtii
Cre12.g492503 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 603115-608114 Chlamydomonas reinhardtii
Cre12.g492503 10.0kb upstream 10.0kb upstream 11668 true chromosome_12: 591447-603114 Chlamydomonas reinhardtii
Cre12.g492503 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 591447-601446 Chlamydomonas reinhardtii
Cre12.g492503 10.0kb downstream 10.0kb downstream 11668 true chromosome_12: 601447-613114 Chlamydomonas reinhardtii
Cre12.g492503 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 603115-613114 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124081335 5260 Chlorophyte Singleton cluster - no MSA
123399068 5275 Viridiplantae Singleton cluster - no MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.03     Low  
cufflinks 0.065     Low High
cufflinks 0.055     Low High
cufflinks 0.031     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.049     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low Low
cufflinks 0.039     Low  
cufflinks 0.092     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low Low
cufflinks 0.022     Low  
cufflinks 0.03     Low  
cufflinks 0.026     Low  
cufflinks 0.019     Low  
cufflinks 0.027     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.024     Low  
cufflinks 0.023     Low  
cufflinks 0.013     Low Low
cufflinks 0.023     Low  
cufflinks 0.033     Low  
cufflinks 0.007     Low Low
cufflinks 0.112261 0.0 0.301059 Low  
cufflinks 1.80188 0.0 4.11163    
cufflinks 0.00497452 0.0 0.0602018 Low Low
cufflinks 0.00753104 0.0 0.0445786 Low Low
cufflinks 0.241046 0.0 0.663421 Low  

0 Strain