Gene : Cre12.g492050 C. reinhardtii v5.6
Defline:  (1 of 21) PF01822 - WSC domain (WSC) Genomic Order:  109
Name:  ? Cre12.g492050 Secondary Identifier:  ? PAC:30791714
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g492050 0.5kb upstream 0.5kb upstream 7116 true chromosome_12: 651071-658186 Chlamydomonas reinhardtii
Cre12.g492050 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 657687-658186 Chlamydomonas reinhardtii
Cre12.g492050 0.5kb downstream 0.5kb downstream 7116 true chromosome_12: 650571-657686 Chlamydomonas reinhardtii
Cre12.g492050 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 650571-651070 Chlamydomonas reinhardtii
Cre12.g492050 1.0kb upstream 1.0kb upstream 7616 true chromosome_12: 651071-658686 Chlamydomonas reinhardtii
Cre12.g492050 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 657687-658686 Chlamydomonas reinhardtii
Cre12.g492050 1.0kb downstream 1.0kb downstream 7616 true chromosome_12: 650071-657686 Chlamydomonas reinhardtii
Cre12.g492050 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 650071-651070 Chlamydomonas reinhardtii
Cre12.g492050 2.0kb upstream 2.0kb upstream 8616 true chromosome_12: 651071-659686 Chlamydomonas reinhardtii
Cre12.g492050 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 657687-659686 Chlamydomonas reinhardtii
Cre12.g492050 2.0kb downstream 2.0kb downstream 8616 true chromosome_12: 649071-657686 Chlamydomonas reinhardtii
Cre12.g492050 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 649071-651070 Chlamydomonas reinhardtii
Cre12.g492050 5.0kb upstream 5.0kb upstream 11616 true chromosome_12: 651071-662686 Chlamydomonas reinhardtii
Cre12.g492050 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 657687-662686 Chlamydomonas reinhardtii
Cre12.g492050 5.0kb downstream 5.0kb downstream 11616 true chromosome_12: 646071-657686 Chlamydomonas reinhardtii
Cre12.g492050 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 646071-651070 Chlamydomonas reinhardtii
Cre12.g492050 10.0kb upstream 10.0kb upstream 16616 true chromosome_12: 651071-667686 Chlamydomonas reinhardtii
Cre12.g492050 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 657687-667686 Chlamydomonas reinhardtii
Cre12.g492050 10.0kb downstream 10.0kb downstream 16616 true chromosome_12: 641071-657686 Chlamydomonas reinhardtii
Cre12.g492050 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 641071-651070 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124081647 5260 Chlorophyte View MSA
123399365 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.005     Low  
cufflinks 0.012     Low High
cufflinks 0.002     Low Low
cufflinks 0.003     Low  
cufflinks 0.006     Low  
cufflinks 0.005     Low  
cufflinks 0.003     Low  
cufflinks 0.003     Low  
cufflinks 0.007     Low  
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.021     Low High
cufflinks 0.003     Low  
cufflinks 0.002     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.012     Low High
cufflinks 0.208053 0.0 0.457278 Low  
cufflinks 0.585294 0.0 1.35553    
cufflinks 0.0043911 0.0 0.0344056 Low Low
cufflinks 0.129696 0.0 0.296923 Low  
cufflinks 0.558224 0.0 1.2227    

0 Strain