Gene : Cre12.g495701 C. reinhardtii v5.6
Defline:  (1 of 37) PF00530 - Scavenger receptor cysteine-rich domain (SRCR) Genomic Order:  133
Name:  ? Cre12.g495701 Secondary Identifier:  ? PAC:30793483
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g495701 0.5kb upstream 0.5kb upstream 4526 true chromosome_12: 783356-787881 Chlamydomonas reinhardtii
Cre12.g495701 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 787382-787881 Chlamydomonas reinhardtii
Cre12.g495701 0.5kb downstream 0.5kb downstream 4526 true chromosome_12: 782856-787381 Chlamydomonas reinhardtii
Cre12.g495701 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 782856-783355 Chlamydomonas reinhardtii
Cre12.g495701 1.0kb upstream 1.0kb upstream 5026 true chromosome_12: 783356-788381 Chlamydomonas reinhardtii
Cre12.g495701 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 787382-788381 Chlamydomonas reinhardtii
Cre12.g495701 1.0kb downstream 1.0kb downstream 5026 true chromosome_12: 782356-787381 Chlamydomonas reinhardtii
Cre12.g495701 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 782356-783355 Chlamydomonas reinhardtii
Cre12.g495701 2.0kb upstream 2.0kb upstream 6026 true chromosome_12: 783356-789381 Chlamydomonas reinhardtii
Cre12.g495701 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 787382-789381 Chlamydomonas reinhardtii
Cre12.g495701 2.0kb downstream 2.0kb downstream 6026 true chromosome_12: 781356-787381 Chlamydomonas reinhardtii
Cre12.g495701 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 781356-783355 Chlamydomonas reinhardtii
Cre12.g495701 5.0kb upstream 5.0kb upstream 9026 true chromosome_12: 783356-792381 Chlamydomonas reinhardtii
Cre12.g495701 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 787382-792381 Chlamydomonas reinhardtii
Cre12.g495701 5.0kb downstream 5.0kb downstream 9026 true chromosome_12: 778356-787381 Chlamydomonas reinhardtii
Cre12.g495701 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 778356-783355 Chlamydomonas reinhardtii
Cre12.g495701 10.0kb upstream 10.0kb upstream 14026 true chromosome_12: 783356-797381 Chlamydomonas reinhardtii
Cre12.g495701 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 787382-797381 Chlamydomonas reinhardtii
Cre12.g495701 10.0kb downstream 10.0kb downstream 14026 true chromosome_12: 773356-787381 Chlamydomonas reinhardtii
Cre12.g495701 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 773356-783355 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124081347 5260 Chlorophyte Singleton cluster - no MSA
123399080 5275 Viridiplantae Singleton cluster - no MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.033     Low  
cufflinks 0.067     Low High
cufflinks 0.023     Low  
cufflinks 0.045     Low  
cufflinks 0.042     Low  
cufflinks 0.062     Low High
cufflinks 0.044     Low  
cufflinks 0.015     Low  
cufflinks 0.009     Low Low
cufflinks 0.021     Low  
cufflinks 0.051     Low  
cufflinks 0.024     Low  
cufflinks 0.046     Low  
cufflinks 0.016     Low  
cufflinks 0.027     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.023     Low  
cufflinks 0.019     Low  
cufflinks 0.012     Low Low
cufflinks 0.017     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.039     Low  
cufflinks 0.077     Low High
cufflinks 0.006     Low Low
cufflinks 0.076282 0.0 0.192873 Low High
cufflinks 0.506679 0.0 1.23569   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0348705 0.0 0.0997199 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain