Gene : HIS6 C. reinhardtii v5.6
Primary Identifier:  ? Cre12.g495300 Defline:  (1 of 1) 5.3.1.16 - 1-(5-phosphoribosyl)-5- ((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase / Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
Genomic Order:  125 Name:  ? Cre12.g495300
Secondary Identifier:  ? PAC:30792995
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii HISTSYN-PWY Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g495300 0.5kb upstream 0.5kb upstream 3646 true chromosome_12: 740316-743961 Chlamydomonas reinhardtii
Cre12.g495300 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 743462-743961 Chlamydomonas reinhardtii
Cre12.g495300 0.5kb downstream 0.5kb downstream 3646 true chromosome_12: 739816-743461 Chlamydomonas reinhardtii
Cre12.g495300 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 739816-740315 Chlamydomonas reinhardtii
Cre12.g495300 1.0kb upstream 1.0kb upstream 4146 true chromosome_12: 740316-744461 Chlamydomonas reinhardtii
Cre12.g495300 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 743462-744461 Chlamydomonas reinhardtii
Cre12.g495300 1.0kb downstream 1.0kb downstream 4146 true chromosome_12: 739316-743461 Chlamydomonas reinhardtii
Cre12.g495300 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 739316-740315 Chlamydomonas reinhardtii
Cre12.g495300 2.0kb upstream 2.0kb upstream 5146 true chromosome_12: 740316-745461 Chlamydomonas reinhardtii
Cre12.g495300 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 743462-745461 Chlamydomonas reinhardtii
Cre12.g495300 2.0kb downstream 2.0kb downstream 5146 true chromosome_12: 738316-743461 Chlamydomonas reinhardtii
Cre12.g495300 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 738316-740315 Chlamydomonas reinhardtii
Cre12.g495300 5.0kb upstream 5.0kb upstream 8146 true chromosome_12: 740316-748461 Chlamydomonas reinhardtii
Cre12.g495300 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 743462-748461 Chlamydomonas reinhardtii
Cre12.g495300 5.0kb downstream 5.0kb downstream 8146 true chromosome_12: 735316-743461 Chlamydomonas reinhardtii
Cre12.g495300 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 735316-740315 Chlamydomonas reinhardtii
Cre12.g495300 10.0kb upstream 10.0kb upstream 13146 true chromosome_12: 740316-753461 Chlamydomonas reinhardtii
Cre12.g495300 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 743462-753461 Chlamydomonas reinhardtii
Cre12.g495300 10.0kb downstream 10.0kb downstream 13146 true chromosome_12: 730316-743461 Chlamydomonas reinhardtii
Cre12.g495300 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 730316-740315 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124108506 5260 Chlorophyte View MSA
123424389 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.452     High  
cufflinks 9.898        
cufflinks 5.357        
cufflinks 6.999        
cufflinks 9.489        
cufflinks 9.871        
cufflinks 5.299        
cufflinks 6.751        
cufflinks 11.623     High High
cufflinks 3.626       Low
cufflinks 6.543        
cufflinks 7.215        
cufflinks 5.258        
cufflinks 9.471        
cufflinks 6.749        
cufflinks 15.916     High High
cufflinks 5.287        
cufflinks 6.393        
cufflinks 1.344       Low
cufflinks 4.82        
cufflinks 7.21        
cufflinks 6.558        
cufflinks 6.772        
cufflinks 8.105        
cufflinks 6.153        
cufflinks 13.8124 2.06502 25.5599   Low
cufflinks 29.0767 7.77201 50.3814 High  
cufflinks 2.08826 0.0 5.03765   Low
cufflinks 8.98006 1.52479 16.4353   Low
cufflinks 19.2689 3.77382 34.7641    

0 Strain