Gene : PRPS16 C. reinhardtii v5.6
Primary Identifier:  ? Cre12.g494450 Defline:  (1 of 1) K02959 - small subunit ribosomal protein S16 (RP-S16, MRPS16, rpsP)
Genomic Order:  58 Name:  ? Cre12.g494450
Secondary Identifier:  ? PAC:30791769
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g494450 0.5kb upstream 0.5kb upstream 1493 true chromosome_12: 342830-344322 Chlamydomonas reinhardtii
Cre12.g494450 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 342830-343329 Chlamydomonas reinhardtii
Cre12.g494450 0.5kb downstream 0.5kb downstream 1493 true chromosome_12: 343330-344822 Chlamydomonas reinhardtii
Cre12.g494450 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 344323-344822 Chlamydomonas reinhardtii
Cre12.g494450 1.0kb upstream 1.0kb upstream 1993 true chromosome_12: 342330-344322 Chlamydomonas reinhardtii
Cre12.g494450 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 342330-343329 Chlamydomonas reinhardtii
Cre12.g494450 1.0kb downstream 1.0kb downstream 1993 true chromosome_12: 343330-345322 Chlamydomonas reinhardtii
Cre12.g494450 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 344323-345322 Chlamydomonas reinhardtii
Cre12.g494450 2.0kb upstream 2.0kb upstream 2993 true chromosome_12: 341330-344322 Chlamydomonas reinhardtii
Cre12.g494450 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 341330-343329 Chlamydomonas reinhardtii
Cre12.g494450 2.0kb downstream 2.0kb downstream 2993 true chromosome_12: 343330-346322 Chlamydomonas reinhardtii
Cre12.g494450 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 344323-346322 Chlamydomonas reinhardtii
Cre12.g494450 5.0kb upstream 5.0kb upstream 5993 true chromosome_12: 338330-344322 Chlamydomonas reinhardtii
Cre12.g494450 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 338330-343329 Chlamydomonas reinhardtii
Cre12.g494450 5.0kb downstream 5.0kb downstream 5993 true chromosome_12: 343330-349322 Chlamydomonas reinhardtii
Cre12.g494450 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 344323-349322 Chlamydomonas reinhardtii
Cre12.g494450 10.0kb upstream 10.0kb upstream 10993 true chromosome_12: 333330-344322 Chlamydomonas reinhardtii
Cre12.g494450 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 333330-343329 Chlamydomonas reinhardtii
Cre12.g494450 10.0kb downstream 10.0kb downstream 10993 true chromosome_12: 343330-354322 Chlamydomonas reinhardtii
Cre12.g494450 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 344323-354322 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112797 5260 Chlorophyte View MSA
123426601 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1088.36     High High
cufflinks 390.457     High  
cufflinks 223.047     High  
cufflinks 266.84     High  
cufflinks 491.009     High  
cufflinks 505.657     High  
cufflinks 79.06     High Low
cufflinks 243.738     High  
cufflinks 1049.75     High High
cufflinks 532.138     High  
cufflinks 322.771     High  
cufflinks 357.786     High  
cufflinks 451.781     High  
cufflinks 487.674     High  
cufflinks 359.165     High  
cufflinks 947.566     High High
cufflinks 679.359     High  
cufflinks 335.422     High  
cufflinks 117.647     High Low
cufflinks 132.946     High Low
cufflinks 282.038     High  
cufflinks 693.288     High  
cufflinks 236.12     High  
cufflinks 398.72     High  
cufflinks 687.863     High  
cufflinks 491.058 0.0 997.077 High Low
cufflinks 357.541 61.3415 653.741 High  
cufflinks 195.045 0.0 406.523 High  
cufflinks 216.023 0.0 442.614 High Low
cufflinks 221.727 12.4186 431.035 High Low

0 Strain