Gene : DEG1C C. reinhardtii v5.6
Primary Identifier:  ? Cre12.g498500 Defline:  (1 of 3) PTHR22939:SF81 - PROTEASE DO-LIKE 1, CHLOROPLASTIC
Genomic Order:  600 Name:  ? Cre12.g498500
Secondary Identifier:  ? PAC:30793568
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g498500 0.5kb upstream 0.5kb upstream 4442 true chromosome_12: 3243269-3247710 Chlamydomonas reinhardtii
Cre12.g498500 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 3243269-3243768 Chlamydomonas reinhardtii
Cre12.g498500 0.5kb downstream 0.5kb downstream 4442 true chromosome_12: 3243769-3248210 Chlamydomonas reinhardtii
Cre12.g498500 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 3247711-3248210 Chlamydomonas reinhardtii
Cre12.g498500 1.0kb upstream 1.0kb upstream 4942 true chromosome_12: 3242769-3247710 Chlamydomonas reinhardtii
Cre12.g498500 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 3242769-3243768 Chlamydomonas reinhardtii
Cre12.g498500 1.0kb downstream 1.0kb downstream 4942 true chromosome_12: 3243769-3248710 Chlamydomonas reinhardtii
Cre12.g498500 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 3247711-3248710 Chlamydomonas reinhardtii
Cre12.g498500 2.0kb upstream 2.0kb upstream 5942 true chromosome_12: 3241769-3247710 Chlamydomonas reinhardtii
Cre12.g498500 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 3241769-3243768 Chlamydomonas reinhardtii
Cre12.g498500 2.0kb downstream 2.0kb downstream 5942 true chromosome_12: 3243769-3249710 Chlamydomonas reinhardtii
Cre12.g498500 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 3247711-3249710 Chlamydomonas reinhardtii
Cre12.g498500 5.0kb upstream 5.0kb upstream 8942 true chromosome_12: 3238769-3247710 Chlamydomonas reinhardtii
Cre12.g498500 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 3238769-3243768 Chlamydomonas reinhardtii
Cre12.g498500 5.0kb downstream 5.0kb downstream 8942 true chromosome_12: 3243769-3252710 Chlamydomonas reinhardtii
Cre12.g498500 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 3247711-3252710 Chlamydomonas reinhardtii
Cre12.g498500 10.0kb upstream 10.0kb upstream 13942 true chromosome_12: 3233769-3247710 Chlamydomonas reinhardtii
Cre12.g498500 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 3233769-3243768 Chlamydomonas reinhardtii
Cre12.g498500 10.0kb downstream 10.0kb downstream 13942 true chromosome_12: 3243769-3257710 Chlamydomonas reinhardtii
Cre12.g498500 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 3247711-3257710 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111132 5260 Chlorophyte View MSA
123427247 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.726        
cufflinks 1.116        
cufflinks 5.941       High
cufflinks 1.896        
cufflinks 3.062        
cufflinks 1.573        
cufflinks 0.976        
cufflinks 2.241        
cufflinks 1.117        
cufflinks 0.496       Low
cufflinks 2.065        
cufflinks 1.611        
cufflinks 12.74     High High
cufflinks 4.264       High
cufflinks 0.804       Low
cufflinks 1.73        
cufflinks 3.439        
cufflinks 4.403       High
cufflinks 0.396       Low
cufflinks 2.017        
cufflinks 1.283        
cufflinks 2.279        
cufflinks 1.488        
cufflinks 2.988        
cufflinks 2.682        
cufflinks 81.8785 0.0 166.704 High Low
cufflinks 38.909 10.2078 67.6103 High  
cufflinks 6.12941 0.0 12.9753   Low
cufflinks 2.83601 0.248822 5.4232   Low
cufflinks 10.4695 2.04722 18.8918    

0 Strain