Gene : CAS C. reinhardtii v5.6
Primary Identifier:  ? Cre12.g497300 Defline:  (1 of 25) PF00581 - Rhodanese-like domain (Rhodanese)
Genomic Order:  624 Name:  ? Cre12.g497300
Secondary Identifier:  ? PAC:30792664
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g497300 0.5kb upstream 0.5kb upstream 4205 true chromosome_12: 3363950-3368154 Chlamydomonas reinhardtii
Cre12.g497300 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 3363950-3364449 Chlamydomonas reinhardtii
Cre12.g497300 0.5kb downstream 0.5kb downstream 4205 true chromosome_12: 3364450-3368654 Chlamydomonas reinhardtii
Cre12.g497300 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 3368155-3368654 Chlamydomonas reinhardtii
Cre12.g497300 1.0kb upstream 1.0kb upstream 4705 true chromosome_12: 3363450-3368154 Chlamydomonas reinhardtii
Cre12.g497300 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 3363450-3364449 Chlamydomonas reinhardtii
Cre12.g497300 1.0kb downstream 1.0kb downstream 4705 true chromosome_12: 3364450-3369154 Chlamydomonas reinhardtii
Cre12.g497300 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 3368155-3369154 Chlamydomonas reinhardtii
Cre12.g497300 2.0kb upstream 2.0kb upstream 5705 true chromosome_12: 3362450-3368154 Chlamydomonas reinhardtii
Cre12.g497300 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 3362450-3364449 Chlamydomonas reinhardtii
Cre12.g497300 2.0kb downstream 2.0kb downstream 5705 true chromosome_12: 3364450-3370154 Chlamydomonas reinhardtii
Cre12.g497300 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 3368155-3370154 Chlamydomonas reinhardtii
Cre12.g497300 5.0kb upstream 5.0kb upstream 8705 true chromosome_12: 3359450-3368154 Chlamydomonas reinhardtii
Cre12.g497300 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 3359450-3364449 Chlamydomonas reinhardtii
Cre12.g497300 5.0kb downstream 5.0kb downstream 8705 true chromosome_12: 3364450-3373154 Chlamydomonas reinhardtii
Cre12.g497300 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 3368155-3373154 Chlamydomonas reinhardtii
Cre12.g497300 10.0kb upstream 10.0kb upstream 13705 true chromosome_12: 3354450-3368154 Chlamydomonas reinhardtii
Cre12.g497300 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 3354450-3364449 Chlamydomonas reinhardtii
Cre12.g497300 10.0kb downstream 10.0kb downstream 13705 true chromosome_12: 3364450-3378154 Chlamydomonas reinhardtii
Cre12.g497300 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 3368155-3378154 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109321 5260 Chlorophyte View MSA
123427649 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 61.53     High  
cufflinks 57.792     High  
cufflinks 30.208     High  
cufflinks 29.096     High  
cufflinks 49.893     High  
cufflinks 54.598     High  
cufflinks 21.021     High  
cufflinks 37.456     High  
cufflinks 68.681     High  
cufflinks 44.817     High  
cufflinks 10.366        
cufflinks 40.298     High  
cufflinks 44.191     High  
cufflinks 54.821     High  
cufflinks 39.04     High  
cufflinks 62.446     High  
cufflinks 71.65     High  
cufflinks 47.45     High  
cufflinks 0.994       Low
cufflinks 1.225       Low
cufflinks 47.944     High  
cufflinks 59.944     High  
cufflinks 15.323     High  
cufflinks 20.536     High  
cufflinks 70.46     High  
cufflinks 226.835 0.0 498.327 High  
cufflinks 196.496 31.1477 361.844 High  
cufflinks 216.583 0.0 509.183 High  
cufflinks 98.5398 0.0 217.941 High  
cufflinks 127.509 0.0 259.775 High  

0 Strain