Gene : Cre12.g497101 C. reinhardtii v5.6
Defline:  (1 of 1) PF13331//PF13662 - Domain of unknown function (DUF4093) (DUF4093) // Toprim domain (Toprim_4) Genomic Order:  629
Name:  ? Cre12.g497101 Secondary Identifier:  ? PAC:30791918
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g497101 0.5kb upstream 0.5kb upstream 3177 true chromosome_12: 3380916-3384092 Chlamydomonas reinhardtii
Cre12.g497101 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 3383593-3384092 Chlamydomonas reinhardtii
Cre12.g497101 0.5kb downstream 0.5kb downstream 3177 true chromosome_12: 3380416-3383592 Chlamydomonas reinhardtii
Cre12.g497101 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 3380416-3380915 Chlamydomonas reinhardtii
Cre12.g497101 1.0kb upstream 1.0kb upstream 3677 true chromosome_12: 3380916-3384592 Chlamydomonas reinhardtii
Cre12.g497101 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 3383593-3384592 Chlamydomonas reinhardtii
Cre12.g497101 1.0kb downstream 1.0kb downstream 3677 true chromosome_12: 3379916-3383592 Chlamydomonas reinhardtii
Cre12.g497101 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 3379916-3380915 Chlamydomonas reinhardtii
Cre12.g497101 2.0kb upstream 2.0kb upstream 4677 true chromosome_12: 3380916-3385592 Chlamydomonas reinhardtii
Cre12.g497101 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 3383593-3385592 Chlamydomonas reinhardtii
Cre12.g497101 2.0kb downstream 2.0kb downstream 4677 true chromosome_12: 3378916-3383592 Chlamydomonas reinhardtii
Cre12.g497101 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 3378916-3380915 Chlamydomonas reinhardtii
Cre12.g497101 5.0kb upstream 5.0kb upstream 7677 true chromosome_12: 3380916-3388592 Chlamydomonas reinhardtii
Cre12.g497101 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 3383593-3388592 Chlamydomonas reinhardtii
Cre12.g497101 5.0kb downstream 5.0kb downstream 7677 true chromosome_12: 3375916-3383592 Chlamydomonas reinhardtii
Cre12.g497101 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 3375916-3380915 Chlamydomonas reinhardtii
Cre12.g497101 10.0kb upstream 10.0kb upstream 12677 true chromosome_12: 3380916-3393592 Chlamydomonas reinhardtii
Cre12.g497101 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 3383593-3393592 Chlamydomonas reinhardtii
Cre12.g497101 10.0kb downstream 10.0kb downstream 12677 true chromosome_12: 3370916-3383592 Chlamydomonas reinhardtii
Cre12.g497101 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 3370916-3380915 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124094398 5260 Chlorophyte View MSA
123411248 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.415       Low
cufflinks 0.888        
cufflinks 1.03        
cufflinks 1.453        
cufflinks 0.652        
cufflinks 0.864        
cufflinks 1.132        
cufflinks 1.678       High
cufflinks 0.608        
cufflinks 0.214       Low
cufflinks 1.369        
cufflinks 1.248        
cufflinks 0.834        
cufflinks 0.885        
cufflinks 0.964        
cufflinks 0.791        
cufflinks 0.897        
cufflinks 0.932        
cufflinks 0.351       Low
cufflinks 1.849       High
cufflinks 0.992        
cufflinks 1.282        
cufflinks 1.097        
cufflinks 2.221       High
cufflinks 0.606        
cufflinks 10.3246 1.68929 18.96   Low
cufflinks 3.63513 0.0 7.30771    
cufflinks 1.71187 0.0 4.28699   Low
cufflinks 2.11553 0.0673986 4.16366   Low
cufflinks 3.34317 0.112317 6.57403    

0 Strain