Gene : RRP4 C. reinhardtii v5.6
Primary Identifier:  ? Cre12.g496450 Defline:  (1 of 1) K03679 - exosome complex component RRP4 (RRP4, EXOSC2)
Genomic Order:  640 Name:  ? Cre12.g496450
Secondary Identifier:  ? PAC:30792232
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g496450 0.5kb upstream 0.5kb upstream 2557 true chromosome_12: 3432423-3434979 Chlamydomonas reinhardtii
Cre12.g496450 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 3434480-3434979 Chlamydomonas reinhardtii
Cre12.g496450 0.5kb downstream 0.5kb downstream 2557 true chromosome_12: 3431923-3434479 Chlamydomonas reinhardtii
Cre12.g496450 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 3431923-3432422 Chlamydomonas reinhardtii
Cre12.g496450 1.0kb upstream 1.0kb upstream 3057 true chromosome_12: 3432423-3435479 Chlamydomonas reinhardtii
Cre12.g496450 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 3434480-3435479 Chlamydomonas reinhardtii
Cre12.g496450 1.0kb downstream 1.0kb downstream 3057 true chromosome_12: 3431423-3434479 Chlamydomonas reinhardtii
Cre12.g496450 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 3431423-3432422 Chlamydomonas reinhardtii
Cre12.g496450 2.0kb upstream 2.0kb upstream 4057 true chromosome_12: 3432423-3436479 Chlamydomonas reinhardtii
Cre12.g496450 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 3434480-3436479 Chlamydomonas reinhardtii
Cre12.g496450 2.0kb downstream 2.0kb downstream 4057 true chromosome_12: 3430423-3434479 Chlamydomonas reinhardtii
Cre12.g496450 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 3430423-3432422 Chlamydomonas reinhardtii
Cre12.g496450 5.0kb upstream 5.0kb upstream 7057 true chromosome_12: 3432423-3439479 Chlamydomonas reinhardtii
Cre12.g496450 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 3434480-3439479 Chlamydomonas reinhardtii
Cre12.g496450 5.0kb downstream 5.0kb downstream 7057 true chromosome_12: 3427423-3434479 Chlamydomonas reinhardtii
Cre12.g496450 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 3427423-3432422 Chlamydomonas reinhardtii
Cre12.g496450 10.0kb upstream 10.0kb upstream 12057 true chromosome_12: 3432423-3444479 Chlamydomonas reinhardtii
Cre12.g496450 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 3434480-3444479 Chlamydomonas reinhardtii
Cre12.g496450 10.0kb downstream 10.0kb downstream 12057 true chromosome_12: 3422423-3434479 Chlamydomonas reinhardtii
Cre12.g496450 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 3422423-3432422 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109884 5260 Chlorophyte View MSA
123428223 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.352        
cufflinks 13.759       High
cufflinks 9.441        
cufflinks 10.521        
cufflinks 11.284        
cufflinks 11.591        
cufflinks 13.627     High High
cufflinks 11.818        
cufflinks 8.259        
cufflinks 5.837       Low
cufflinks 8.271        
cufflinks 11.345        
cufflinks 7.02        
cufflinks 12.256        
cufflinks 8.858        
cufflinks 13.332     High High
cufflinks 5.189       Low
cufflinks 9.589        
cufflinks 5.615     High Low
cufflinks 13.595     High High
cufflinks 9.494        
cufflinks 4.871       Low
cufflinks 12.814        
cufflinks 10.168        
cufflinks 4.498       Low
cufflinks 22.4275 1.63076 43.2242   High
cufflinks 11.4691 3.05469 19.8835    
cufflinks 5.43993 0.0 11.3814    
cufflinks 10.0664 1.48106 18.6518   Low
cufflinks 13.6084 2.71979 24.4971   High

0 Strain