Gene : SMT1 C. reinhardtii v5.6
Primary Identifier:  ? Cre12.g500500 Defline:  (1 of 1) 2.1.1.143 - 24-methylenesterol C-methyltransferase / SMT(2)
Genomic Order:  553 Name:  ? Cre12.g500500
Secondary Identifier:  ? PAC:30792280
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g500500 0.5kb upstream 0.5kb upstream 4052 true chromosome_12: 3053904-3057955 Chlamydomonas reinhardtii
Cre12.g500500 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 3057456-3057955 Chlamydomonas reinhardtii
Cre12.g500500 0.5kb downstream 0.5kb downstream 4052 true chromosome_12: 3053404-3057455 Chlamydomonas reinhardtii
Cre12.g500500 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 3053404-3053903 Chlamydomonas reinhardtii
Cre12.g500500 1.0kb upstream 1.0kb upstream 4552 true chromosome_12: 3053904-3058455 Chlamydomonas reinhardtii
Cre12.g500500 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 3057456-3058455 Chlamydomonas reinhardtii
Cre12.g500500 1.0kb downstream 1.0kb downstream 4552 true chromosome_12: 3052904-3057455 Chlamydomonas reinhardtii
Cre12.g500500 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 3052904-3053903 Chlamydomonas reinhardtii
Cre12.g500500 2.0kb upstream 2.0kb upstream 5552 true chromosome_12: 3053904-3059455 Chlamydomonas reinhardtii
Cre12.g500500 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 3057456-3059455 Chlamydomonas reinhardtii
Cre12.g500500 2.0kb downstream 2.0kb downstream 5552 true chromosome_12: 3051904-3057455 Chlamydomonas reinhardtii
Cre12.g500500 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 3051904-3053903 Chlamydomonas reinhardtii
Cre12.g500500 5.0kb upstream 5.0kb upstream 8552 true chromosome_12: 3053904-3062455 Chlamydomonas reinhardtii
Cre12.g500500 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 3057456-3062455 Chlamydomonas reinhardtii
Cre12.g500500 5.0kb downstream 5.0kb downstream 8552 true chromosome_12: 3048904-3057455 Chlamydomonas reinhardtii
Cre12.g500500 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 3048904-3053903 Chlamydomonas reinhardtii
Cre12.g500500 10.0kb upstream 10.0kb upstream 13552 true chromosome_12: 3053904-3067455 Chlamydomonas reinhardtii
Cre12.g500500 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 3057456-3067455 Chlamydomonas reinhardtii
Cre12.g500500 10.0kb downstream 10.0kb downstream 13552 true chromosome_12: 3043904-3057455 Chlamydomonas reinhardtii
Cre12.g500500 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 3043904-3053903 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124108717 5260 Chlorophyte View MSA
123426805 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.648     High  
cufflinks 42.96     High  
cufflinks 59.111     High High
cufflinks 31.615     High  
cufflinks 43.15     High  
cufflinks 50.788     High  
cufflinks 49.601     High  
cufflinks 45.368     High  
cufflinks 22.478     High  
cufflinks 66.652     High High
cufflinks 15.402     High  
cufflinks 34.87     High  
cufflinks 58.814     High High
cufflinks 47.151     High  
cufflinks 24.136     High  
cufflinks 28.912     High  
cufflinks 8.63       Low
cufflinks 47.881     High  
cufflinks 5.311     High Low
cufflinks 6.205       Low
cufflinks 26.89     High  
cufflinks 8.872       Low
cufflinks 50.632     High  
cufflinks 30.036     High  
cufflinks 9.246       Low
cufflinks 1241.3 105.791 2376.82 High High
cufflinks 141.778 20.9774 262.579 High  
cufflinks 125.655 0.0 299.634 High  
cufflinks 154.051 0.0 335.355 High Low
cufflinks 181.576 0.0 407.006 High  

0 Strain