Gene : Cre12.g499650 C. reinhardtii v5.6
Defline:  (1 of 1) KOG3292 - Predicted membrane protein Genomic Order:  571
Name:  ? Cre12.g499650 Secondary Identifier:  ? PAC:30792737
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g499650 0.5kb upstream 0.5kb upstream 3272 true chromosome_12: 3135436-3138707 Chlamydomonas reinhardtii
Cre12.g499650 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 3135436-3135935 Chlamydomonas reinhardtii
Cre12.g499650 0.5kb downstream 0.5kb downstream 3272 true chromosome_12: 3135936-3139207 Chlamydomonas reinhardtii
Cre12.g499650 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 3138708-3139207 Chlamydomonas reinhardtii
Cre12.g499650 1.0kb upstream 1.0kb upstream 3772 true chromosome_12: 3134936-3138707 Chlamydomonas reinhardtii
Cre12.g499650 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 3134936-3135935 Chlamydomonas reinhardtii
Cre12.g499650 1.0kb downstream 1.0kb downstream 3772 true chromosome_12: 3135936-3139707 Chlamydomonas reinhardtii
Cre12.g499650 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 3138708-3139707 Chlamydomonas reinhardtii
Cre12.g499650 2.0kb upstream 2.0kb upstream 4772 true chromosome_12: 3133936-3138707 Chlamydomonas reinhardtii
Cre12.g499650 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 3133936-3135935 Chlamydomonas reinhardtii
Cre12.g499650 2.0kb downstream 2.0kb downstream 4772 true chromosome_12: 3135936-3140707 Chlamydomonas reinhardtii
Cre12.g499650 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 3138708-3140707 Chlamydomonas reinhardtii
Cre12.g499650 5.0kb upstream 5.0kb upstream 7772 true chromosome_12: 3130936-3138707 Chlamydomonas reinhardtii
Cre12.g499650 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 3130936-3135935 Chlamydomonas reinhardtii
Cre12.g499650 5.0kb downstream 5.0kb downstream 7772 true chromosome_12: 3135936-3143707 Chlamydomonas reinhardtii
Cre12.g499650 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 3138708-3143707 Chlamydomonas reinhardtii
Cre12.g499650 10.0kb upstream 10.0kb upstream 12772 true chromosome_12: 3125936-3138707 Chlamydomonas reinhardtii
Cre12.g499650 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 3125936-3135935 Chlamydomonas reinhardtii
Cre12.g499650 10.0kb downstream 10.0kb downstream 12772 true chromosome_12: 3135936-3148707 Chlamydomonas reinhardtii
Cre12.g499650 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 3138708-3148707 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111131 5260 Chlorophyte View MSA
123428191 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.415       Low
cufflinks 5.445        
cufflinks 5.611        
cufflinks 4.959        
cufflinks 4.312        
cufflinks 4.692        
cufflinks 5.65        
cufflinks 5.778        
cufflinks 4.839        
cufflinks 3.187       Low
cufflinks 4.926        
cufflinks 4.973        
cufflinks 6.081        
cufflinks 5.861        
cufflinks 5.067        
cufflinks 4.509        
cufflinks 4.552        
cufflinks 4.926        
cufflinks 2.671       Low
cufflinks 7.366       High
cufflinks 4.431        
cufflinks 5.866        
cufflinks 5.597        
cufflinks 6.205       High
cufflinks 5.141        
cufflinks 9.83128 1.67059 17.992   High
cufflinks 11.6739 2.53478 20.813   High
cufflinks 15.7239 0.0 31.7749    
cufflinks 5.88652 0.824671 10.9484   Low
cufflinks 7.90649 1.19642 14.6166    

0 Strain