Gene : Cre12.g499200 C. reinhardtii v5.6
Genomic Order:  583 Name:  ? Cre12.g499200
Secondary Identifier:  ? PAC:30792309
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g499200 0.5kb upstream 0.5kb upstream 2090 true chromosome_12: 3181489-3183578 Chlamydomonas reinhardtii
Cre12.g499200 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 3183079-3183578 Chlamydomonas reinhardtii
Cre12.g499200 0.5kb downstream 0.5kb downstream 2090 true chromosome_12: 3180989-3183078 Chlamydomonas reinhardtii
Cre12.g499200 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 3180989-3181488 Chlamydomonas reinhardtii
Cre12.g499200 1.0kb upstream 1.0kb upstream 2590 true chromosome_12: 3181489-3184078 Chlamydomonas reinhardtii
Cre12.g499200 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 3183079-3184078 Chlamydomonas reinhardtii
Cre12.g499200 1.0kb downstream 1.0kb downstream 2590 true chromosome_12: 3180489-3183078 Chlamydomonas reinhardtii
Cre12.g499200 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 3180489-3181488 Chlamydomonas reinhardtii
Cre12.g499200 2.0kb upstream 2.0kb upstream 3590 true chromosome_12: 3181489-3185078 Chlamydomonas reinhardtii
Cre12.g499200 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 3183079-3185078 Chlamydomonas reinhardtii
Cre12.g499200 2.0kb downstream 2.0kb downstream 3590 true chromosome_12: 3179489-3183078 Chlamydomonas reinhardtii
Cre12.g499200 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 3179489-3181488 Chlamydomonas reinhardtii
Cre12.g499200 5.0kb upstream 5.0kb upstream 6590 true chromosome_12: 3181489-3188078 Chlamydomonas reinhardtii
Cre12.g499200 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 3183079-3188078 Chlamydomonas reinhardtii
Cre12.g499200 5.0kb downstream 5.0kb downstream 6590 true chromosome_12: 3176489-3183078 Chlamydomonas reinhardtii
Cre12.g499200 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 3176489-3181488 Chlamydomonas reinhardtii
Cre12.g499200 10.0kb upstream 10.0kb upstream 11590 true chromosome_12: 3181489-3193078 Chlamydomonas reinhardtii
Cre12.g499200 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 3183079-3193078 Chlamydomonas reinhardtii
Cre12.g499200 10.0kb downstream 10.0kb downstream 11590 true chromosome_12: 3171489-3183078 Chlamydomonas reinhardtii
Cre12.g499200 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 3171489-3181488 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124081104 5260 Chlorophyte Singleton cluster - no MSA
123398851 5275 Viridiplantae Singleton cluster - no MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.91     High Low
cufflinks 19.427     High  
cufflinks 45.912     High High
cufflinks 42.783     High High
cufflinks 19.882     High  
cufflinks 20.529     High  
cufflinks 28.933     High  
cufflinks 34.07     High  
cufflinks 12.349     High Low
cufflinks 12.371     High Low
cufflinks 54.457     High High
cufflinks 26.673     High  
cufflinks 22.945     High  
cufflinks 17.301     High  
cufflinks 39.234     High High
cufflinks 12.965     High Low
cufflinks 22.992     High  
cufflinks 35.217     High  
cufflinks 13.522     High Low
cufflinks 44.627     High High
cufflinks 33.954     High  
cufflinks 20.24     High  
cufflinks 20.994     High  
cufflinks 41.38     High High
cufflinks 20.292     High  
cufflinks 24.9788 2.40936 47.5482   High
cufflinks 24.3233 6.62224 42.0244    
cufflinks 17.9197 0.0 36.0214   Low
cufflinks 16.8994 2.19802 31.6008    
cufflinks 14.4609 2.90038 26.0214    

0 Strain