Gene : CHLM C. reinhardtii v5.6
Primary Identifier:  ? Cre12.g498550 Defline:  (1 of 1) 2.1.1.11 - Magnesium protoporphyrin IX methyltransferase / S-adenosylmethioninemagnesium protoporphyrin methyltransferase
Genomic Order:  599 Name:  ? Cre12.g498550
Secondary Identifier:  ? PAC:30791717
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii CHLOROPHYLL-SYN Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-7159 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g498550 0.5kb upstream 0.5kb upstream 3928 true chromosome_12: 3240181-3244108 Chlamydomonas reinhardtii
Cre12.g498550 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 3243609-3244108 Chlamydomonas reinhardtii
Cre12.g498550 0.5kb downstream 0.5kb downstream 3928 true chromosome_12: 3239681-3243608 Chlamydomonas reinhardtii
Cre12.g498550 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 3239681-3240180 Chlamydomonas reinhardtii
Cre12.g498550 1.0kb upstream 1.0kb upstream 4428 true chromosome_12: 3240181-3244608 Chlamydomonas reinhardtii
Cre12.g498550 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 3243609-3244608 Chlamydomonas reinhardtii
Cre12.g498550 1.0kb downstream 1.0kb downstream 4428 true chromosome_12: 3239181-3243608 Chlamydomonas reinhardtii
Cre12.g498550 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 3239181-3240180 Chlamydomonas reinhardtii
Cre12.g498550 2.0kb upstream 2.0kb upstream 5428 true chromosome_12: 3240181-3245608 Chlamydomonas reinhardtii
Cre12.g498550 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 3243609-3245608 Chlamydomonas reinhardtii
Cre12.g498550 2.0kb downstream 2.0kb downstream 5428 true chromosome_12: 3238181-3243608 Chlamydomonas reinhardtii
Cre12.g498550 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 3238181-3240180 Chlamydomonas reinhardtii
Cre12.g498550 5.0kb upstream 5.0kb upstream 8428 true chromosome_12: 3240181-3248608 Chlamydomonas reinhardtii
Cre12.g498550 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 3243609-3248608 Chlamydomonas reinhardtii
Cre12.g498550 5.0kb downstream 5.0kb downstream 8428 true chromosome_12: 3235181-3243608 Chlamydomonas reinhardtii
Cre12.g498550 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 3235181-3240180 Chlamydomonas reinhardtii
Cre12.g498550 10.0kb upstream 10.0kb upstream 13428 true chromosome_12: 3240181-3253608 Chlamydomonas reinhardtii
Cre12.g498550 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 3243609-3253608 Chlamydomonas reinhardtii
Cre12.g498550 10.0kb downstream 10.0kb downstream 13428 true chromosome_12: 3230181-3243608 Chlamydomonas reinhardtii
Cre12.g498550 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 3230181-3240180 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109278 5260 Chlorophyte View MSA
123424951 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 109.749     High High
cufflinks 50.237     High  
cufflinks 23.885     High  
cufflinks 32.162     High  
cufflinks 54.379     High  
cufflinks 48.323     High  
cufflinks 7.379       Low
cufflinks 32.701     High  
cufflinks 115.951     High High
cufflinks 22.622     High  
cufflinks 21.435     High  
cufflinks 39.04     High  
cufflinks 29.634     High  
cufflinks 46.528     High  
cufflinks 43.765     High  
cufflinks 103.352     High High
cufflinks 113.251     High High
cufflinks 40.408     High  
cufflinks 1.507       Low
cufflinks 4.564       Low
cufflinks 39.866     High  
cufflinks 117.117     High High
cufflinks 12.435        
cufflinks 29.24     High  
cufflinks 122.897     High High
cufflinks 132.856 0.0 271.683 High Low
cufflinks 144.245 29.6298 258.86 High  
cufflinks 46.6273 0.0 94.4188 High  
cufflinks 43.3538 1.86059 84.847 High Low
cufflinks 85.5206 8.80412 162.237 High  

0 Strain