Gene : Cre12.g501800 C. reinhardtii v5.6
Defline:  (1 of 1) PTHR13193//PTHR13193:SF0 - CGI-140 // PROTEIN ASTERIX Genomic Order:  525
Name:  ? Cre12.g501800 Secondary Identifier:  ? PAC:30792927
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g501800 0.5kb upstream 0.5kb upstream 2115 true chromosome_12: 2919372-2921486 Chlamydomonas reinhardtii
Cre12.g501800 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 2920987-2921486 Chlamydomonas reinhardtii
Cre12.g501800 0.5kb downstream 0.5kb downstream 2115 true chromosome_12: 2918872-2920986 Chlamydomonas reinhardtii
Cre12.g501800 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 2918872-2919371 Chlamydomonas reinhardtii
Cre12.g501800 1.0kb upstream 1.0kb upstream 2615 true chromosome_12: 2919372-2921986 Chlamydomonas reinhardtii
Cre12.g501800 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 2920987-2921986 Chlamydomonas reinhardtii
Cre12.g501800 1.0kb downstream 1.0kb downstream 2615 true chromosome_12: 2918372-2920986 Chlamydomonas reinhardtii
Cre12.g501800 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 2918372-2919371 Chlamydomonas reinhardtii
Cre12.g501800 2.0kb upstream 2.0kb upstream 3615 true chromosome_12: 2919372-2922986 Chlamydomonas reinhardtii
Cre12.g501800 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 2920987-2922986 Chlamydomonas reinhardtii
Cre12.g501800 2.0kb downstream 2.0kb downstream 3615 true chromosome_12: 2917372-2920986 Chlamydomonas reinhardtii
Cre12.g501800 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 2917372-2919371 Chlamydomonas reinhardtii
Cre12.g501800 5.0kb upstream 5.0kb upstream 6615 true chromosome_12: 2919372-2925986 Chlamydomonas reinhardtii
Cre12.g501800 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 2920987-2925986 Chlamydomonas reinhardtii
Cre12.g501800 5.0kb downstream 5.0kb downstream 6615 true chromosome_12: 2914372-2920986 Chlamydomonas reinhardtii
Cre12.g501800 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 2914372-2919371 Chlamydomonas reinhardtii
Cre12.g501800 10.0kb upstream 10.0kb upstream 11615 true chromosome_12: 2919372-2930986 Chlamydomonas reinhardtii
Cre12.g501800 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 2920987-2930986 Chlamydomonas reinhardtii
Cre12.g501800 10.0kb downstream 10.0kb downstream 11615 true chromosome_12: 2909372-2920986 Chlamydomonas reinhardtii
Cre12.g501800 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 2909372-2919371 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124078225 5260 Chlorophyte View MSA
123425690 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.982     High  
cufflinks 16.626     High High
cufflinks 13.307        
cufflinks 11.0        
cufflinks 19.813     High High
cufflinks 15.136     High  
cufflinks 17.27     High High
cufflinks 14.001        
cufflinks 11.29     High  
cufflinks 8.3     High  
cufflinks 7.129       Low
cufflinks 10.373        
cufflinks 18.251     High High
cufflinks 13.469     High  
cufflinks 11.865        
cufflinks 9.919        
cufflinks 6.378       Low
cufflinks 11.271        
cufflinks 8.29     High  
cufflinks 7.311       Low
cufflinks 10.292        
cufflinks 6.442       Low
cufflinks 10.664        
cufflinks 11.087        
cufflinks 6.014       Low
cufflinks 15.3837 2.45359 28.3139   Low
cufflinks 33.9335 9.14331 58.7237 High  
cufflinks 41.9556 0.0 84.3177 High  
cufflinks 13.2055 1.97974 24.4313   Low
cufflinks 52.9 10.212 95.5881 High High

0 Strain