Gene : Cre12.g536900 C. reinhardtii v5.6
Defline:  (1 of 6) PTHR13748//PTHR13748:SF4 - COBW-RELATED // COBW DOMAIN-CONTAINING PROTEIN DDB_G0274527 Genomic Order:  1184
Name:  ? Cre12.g536900 Secondary Identifier:  ? PAC:30793606
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g536900 0.5kb upstream 0.5kb upstream 14742 true chromosome_12: 6233889-6248630 Chlamydomonas reinhardtii
Cre12.g536900 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 6233889-6234388 Chlamydomonas reinhardtii
Cre12.g536900 0.5kb downstream 0.5kb downstream 14742 true chromosome_12: 6234389-6249130 Chlamydomonas reinhardtii
Cre12.g536900 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 6248631-6249130 Chlamydomonas reinhardtii
Cre12.g536900 1.0kb upstream 1.0kb upstream 15242 true chromosome_12: 6233389-6248630 Chlamydomonas reinhardtii
Cre12.g536900 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 6233389-6234388 Chlamydomonas reinhardtii
Cre12.g536900 1.0kb downstream 1.0kb downstream 15242 true chromosome_12: 6234389-6249630 Chlamydomonas reinhardtii
Cre12.g536900 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 6248631-6249630 Chlamydomonas reinhardtii
Cre12.g536900 2.0kb upstream 2.0kb upstream 16242 true chromosome_12: 6232389-6248630 Chlamydomonas reinhardtii
Cre12.g536900 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 6232389-6234388 Chlamydomonas reinhardtii
Cre12.g536900 2.0kb downstream 2.0kb downstream 16242 true chromosome_12: 6234389-6250630 Chlamydomonas reinhardtii
Cre12.g536900 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 6248631-6250630 Chlamydomonas reinhardtii
Cre12.g536900 5.0kb upstream 5.0kb upstream 19242 true chromosome_12: 6229389-6248630 Chlamydomonas reinhardtii
Cre12.g536900 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 6229389-6234388 Chlamydomonas reinhardtii
Cre12.g536900 5.0kb downstream 5.0kb downstream 19242 true chromosome_12: 6234389-6253630 Chlamydomonas reinhardtii
Cre12.g536900 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 6248631-6253630 Chlamydomonas reinhardtii
Cre12.g536900 10.0kb upstream 10.0kb upstream 24242 true chromosome_12: 6224389-6248630 Chlamydomonas reinhardtii
Cre12.g536900 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 6224389-6234388 Chlamydomonas reinhardtii
Cre12.g536900 10.0kb downstream 10.0kb downstream 24242 true chromosome_12: 6234389-6258630 Chlamydomonas reinhardtii
Cre12.g536900 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 6248631-6258630 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124078493 5260 Chlorophyte View MSA
123396414 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.287        
cufflinks 0.677        
cufflinks 0.459        
cufflinks 0.504        
cufflinks 0.522        
cufflinks 0.377        
cufflinks 0.506        
cufflinks 0.411        
cufflinks 0.297        
cufflinks 0.079       Low
cufflinks 0.618        
cufflinks 0.491        
cufflinks 0.112     Low Low
cufflinks 0.537        
cufflinks 0.351        
cufflinks 0.441        
cufflinks 0.057     Low Low
cufflinks 0.511        
cufflinks 0.073     Low Low
cufflinks 0.358        
cufflinks 0.472        
cufflinks 0.051     Low Low
cufflinks 0.455        
cufflinks 0.464        
cufflinks 0.036     Low Low
cufflinks 5.58152 0.620784 10.5423   Low
cufflinks 16.3996 4.08968 28.7095   High
cufflinks 0.507901 0.0 1.2631   Low
cufflinks 2.70451 0.456751 4.95227   Low
cufflinks 5.36383 1.05551 9.67216   High

0 Strain