Gene : RPB4 C. reinhardtii v5.6
Primary Identifier:  ? Cre12.g538400 Defline:  (1 of 1) K03022 - DNA-directed RNA polymerase III subunit RPC8 (RPC8, POLR3H)
Genomic Order:  1219 Name:  ? Cre12.g538400
Secondary Identifier:  ? PAC:30793159
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g538400 0.5kb upstream 0.5kb upstream 3266 true chromosome_12: 6482387-6485652 Chlamydomonas reinhardtii
Cre12.g538400 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 6485153-6485652 Chlamydomonas reinhardtii
Cre12.g538400 0.5kb downstream 0.5kb downstream 3266 true chromosome_12: 6481887-6485152 Chlamydomonas reinhardtii
Cre12.g538400 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 6481887-6482386 Chlamydomonas reinhardtii
Cre12.g538400 1.0kb upstream 1.0kb upstream 3766 true chromosome_12: 6482387-6486152 Chlamydomonas reinhardtii
Cre12.g538400 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 6485153-6486152 Chlamydomonas reinhardtii
Cre12.g538400 1.0kb downstream 1.0kb downstream 3766 true chromosome_12: 6481387-6485152 Chlamydomonas reinhardtii
Cre12.g538400 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 6481387-6482386 Chlamydomonas reinhardtii
Cre12.g538400 2.0kb upstream 2.0kb upstream 4766 true chromosome_12: 6482387-6487152 Chlamydomonas reinhardtii
Cre12.g538400 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 6485153-6487152 Chlamydomonas reinhardtii
Cre12.g538400 2.0kb downstream 2.0kb downstream 4766 true chromosome_12: 6480387-6485152 Chlamydomonas reinhardtii
Cre12.g538400 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 6480387-6482386 Chlamydomonas reinhardtii
Cre12.g538400 5.0kb upstream 5.0kb upstream 7766 true chromosome_12: 6482387-6490152 Chlamydomonas reinhardtii
Cre12.g538400 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 6485153-6490152 Chlamydomonas reinhardtii
Cre12.g538400 5.0kb downstream 5.0kb downstream 7766 true chromosome_12: 6477387-6485152 Chlamydomonas reinhardtii
Cre12.g538400 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 6477387-6482386 Chlamydomonas reinhardtii
Cre12.g538400 10.0kb upstream 10.0kb upstream 12766 true chromosome_12: 6482387-6495152 Chlamydomonas reinhardtii
Cre12.g538400 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 6485153-6495152 Chlamydomonas reinhardtii
Cre12.g538400 10.0kb downstream 10.0kb downstream 12766 true chromosome_12: 6472387-6485152 Chlamydomonas reinhardtii
Cre12.g538400 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 6472387-6482386 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109424 5260 Chlorophyte View MSA
123423953 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.453     High  
cufflinks 16.047     High High
cufflinks 8.376        
cufflinks 12.292        
cufflinks 12.029        
cufflinks 12.01        
cufflinks 12.838        
cufflinks 11.257        
cufflinks 9.962        
cufflinks 4.1       Low
cufflinks 9.341        
cufflinks 11.441        
cufflinks 5.873       Low
cufflinks 13.156     High  
cufflinks 8.897        
cufflinks 11.818        
cufflinks 6.388        
cufflinks 10.99        
cufflinks 2.723       Low
cufflinks 6.687        
cufflinks 9.044        
cufflinks 7.401        
cufflinks 9.431        
cufflinks 8.525        
cufflinks 6.206        
cufflinks 29.4648 2.0608 56.8687 High High
cufflinks 23.4846 6.38131 40.5878    
cufflinks 10.6226 0.0 21.5302   Low
cufflinks 13.1389 1.88386 24.3939   Low
cufflinks 27.3887 4.93013 49.8473    

0 Strain