Gene : ZPD1 C. reinhardtii v5.6
Primary Identifier:  ? Cre12.g541750 Defline:  (1 of 1) 1.3.99.30 - Phytoene desaturase (3,4-didehydrolycopene-forming) / 5-step phytoene desaturase
Genomic Order:  1694 Name:  ? Cre12.g541750
Secondary Identifier:  ? PAC:30793360
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii PWY-6287 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g541750 0.5kb upstream 0.5kb upstream 8875 true chromosome_12: 9214919-9223793 Chlamydomonas reinhardtii
Cre12.g541750 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 9214919-9215418 Chlamydomonas reinhardtii
Cre12.g541750 0.5kb downstream 0.5kb downstream 8875 true chromosome_12: 9215419-9224293 Chlamydomonas reinhardtii
Cre12.g541750 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 9223794-9224293 Chlamydomonas reinhardtii
Cre12.g541750 1.0kb upstream 1.0kb upstream 9375 true chromosome_12: 9214419-9223793 Chlamydomonas reinhardtii
Cre12.g541750 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 9214419-9215418 Chlamydomonas reinhardtii
Cre12.g541750 1.0kb downstream 1.0kb downstream 9375 true chromosome_12: 9215419-9224793 Chlamydomonas reinhardtii
Cre12.g541750 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 9223794-9224793 Chlamydomonas reinhardtii
Cre12.g541750 2.0kb upstream 2.0kb upstream 10375 true chromosome_12: 9213419-9223793 Chlamydomonas reinhardtii
Cre12.g541750 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 9213419-9215418 Chlamydomonas reinhardtii
Cre12.g541750 2.0kb downstream 2.0kb downstream 10375 true chromosome_12: 9215419-9225793 Chlamydomonas reinhardtii
Cre12.g541750 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 9223794-9225793 Chlamydomonas reinhardtii
Cre12.g541750 5.0kb upstream 5.0kb upstream 13375 true chromosome_12: 9210419-9223793 Chlamydomonas reinhardtii
Cre12.g541750 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 9210419-9215418 Chlamydomonas reinhardtii
Cre12.g541750 5.0kb downstream 5.0kb downstream 13375 true chromosome_12: 9215419-9228793 Chlamydomonas reinhardtii
Cre12.g541750 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 9223794-9228793 Chlamydomonas reinhardtii
Cre12.g541750 10.0kb upstream 10.0kb upstream 18375 true chromosome_12: 9205419-9223793 Chlamydomonas reinhardtii
Cre12.g541750 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 9205419-9215418 Chlamydomonas reinhardtii
Cre12.g541750 10.0kb downstream 10.0kb downstream 18375 true chromosome_12: 9215419-9233793 Chlamydomonas reinhardtii
Cre12.g541750 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 9223794-9233793 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124085969 5260 Chlorophyte View MSA
123403387 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.962        
cufflinks 1.529        
cufflinks 1.108        
cufflinks 1.391        
cufflinks 1.152        
cufflinks 1.172        
cufflinks 1.079        
cufflinks 1.763       High
cufflinks 1.364        
cufflinks 0.277       Low
cufflinks 1.278        
cufflinks 1.454        
cufflinks 0.862        
cufflinks 1.139        
cufflinks 1.2        
cufflinks 1.387        
cufflinks 1.601        
cufflinks 1.171        
cufflinks 0.31       Low
cufflinks 0.948        
cufflinks 1.193        
cufflinks 1.436        
cufflinks 0.881        
cufflinks 1.891       High
cufflinks 1.55        
cufflinks 1.02867 0.0303965 2.02694   Low
cufflinks 10.0781 2.72028 17.4359   High
cufflinks 5.88351 0.0 11.9829    
cufflinks 1.75386 0.168137 3.33959    
cufflinks 2.49704 0.275076 4.719   Low

0 Strain