Gene : OPR54 C. reinhardtii v5.6
Primary Identifier:  ? Cre12.g541700 Defline:  (1 of 85) PTHR21228 - FAST LEU-RICH DOMAIN-CONTAINING
Genomic Order:  1695 Name:  ? Cre12.g541700
Secondary Identifier:  ? PAC:30793580
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g541700 0.5kb upstream 0.5kb upstream 6796 true chromosome_12: 9225253-9232048 Chlamydomonas reinhardtii
Cre12.g541700 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 9231549-9232048 Chlamydomonas reinhardtii
Cre12.g541700 0.5kb downstream 0.5kb downstream 6796 true chromosome_12: 9224753-9231548 Chlamydomonas reinhardtii
Cre12.g541700 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 9224753-9225252 Chlamydomonas reinhardtii
Cre12.g541700 1.0kb upstream 1.0kb upstream 7296 true chromosome_12: 9225253-9232548 Chlamydomonas reinhardtii
Cre12.g541700 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 9231549-9232548 Chlamydomonas reinhardtii
Cre12.g541700 1.0kb downstream 1.0kb downstream 7296 true chromosome_12: 9224253-9231548 Chlamydomonas reinhardtii
Cre12.g541700 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 9224253-9225252 Chlamydomonas reinhardtii
Cre12.g541700 2.0kb upstream 2.0kb upstream 8296 true chromosome_12: 9225253-9233548 Chlamydomonas reinhardtii
Cre12.g541700 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 9231549-9233548 Chlamydomonas reinhardtii
Cre12.g541700 2.0kb downstream 2.0kb downstream 8296 true chromosome_12: 9223253-9231548 Chlamydomonas reinhardtii
Cre12.g541700 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 9223253-9225252 Chlamydomonas reinhardtii
Cre12.g541700 5.0kb upstream 5.0kb upstream 11296 true chromosome_12: 9225253-9236548 Chlamydomonas reinhardtii
Cre12.g541700 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 9231549-9236548 Chlamydomonas reinhardtii
Cre12.g541700 5.0kb downstream 5.0kb downstream 11296 true chromosome_12: 9220253-9231548 Chlamydomonas reinhardtii
Cre12.g541700 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 9220253-9225252 Chlamydomonas reinhardtii
Cre12.g541700 10.0kb upstream 10.0kb upstream 16296 true chromosome_12: 9225253-9241548 Chlamydomonas reinhardtii
Cre12.g541700 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 9231549-9241548 Chlamydomonas reinhardtii
Cre12.g541700 10.0kb downstream 10.0kb downstream 16296 true chromosome_12: 9215253-9231548 Chlamydomonas reinhardtii
Cre12.g541700 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 9215253-9225252 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124113564 5260 Chlorophyte View MSA
123427594 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.179       Low
cufflinks 0.491        
cufflinks 0.765       High
cufflinks 0.865       High
cufflinks 0.387        
cufflinks 0.297        
cufflinks 0.74        
cufflinks 0.724        
cufflinks 0.223       Low
cufflinks 0.085       Low
cufflinks 0.808       High
cufflinks 0.647        
cufflinks 0.257        
cufflinks 0.368        
cufflinks 0.639        
cufflinks 0.273        
cufflinks 0.216       Low
cufflinks 0.356        
cufflinks 0.229        
cufflinks 0.869       High
cufflinks 0.568        
cufflinks 0.255        
cufflinks 0.605        
cufflinks 0.765       High
cufflinks 0.328        
cufflinks 0.773492 0.0 1.55298   High
cufflinks 2.08167 0.0691528 4.09418    
cufflinks 1.39154 0.0 3.27569    
cufflinks 0.781374 0.0 1.56983    
cufflinks 1.27538 0.0025327 2.54823   Low

0 Strain