Gene : Cre12.g547000 C. reinhardtii v5.6
Defline:  (1 of 2) PF02367 - Threonylcarbamoyl adenosine biosynthesis protein TsaE (TsaE) Genomic Order:  1573
Name:  ? Cre12.g547000 Secondary Identifier:  ? PAC:30792363
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g547000 0.5kb upstream 0.5kb upstream 1886 true chromosome_12: 8620402-8622287 Chlamydomonas reinhardtii
Cre12.g547000 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 8621788-8622287 Chlamydomonas reinhardtii
Cre12.g547000 0.5kb downstream 0.5kb downstream 1886 true chromosome_12: 8619902-8621787 Chlamydomonas reinhardtii
Cre12.g547000 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 8619902-8620401 Chlamydomonas reinhardtii
Cre12.g547000 1.0kb upstream 1.0kb upstream 2386 true chromosome_12: 8620402-8622787 Chlamydomonas reinhardtii
Cre12.g547000 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 8621788-8622787 Chlamydomonas reinhardtii
Cre12.g547000 1.0kb downstream 1.0kb downstream 2386 true chromosome_12: 8619402-8621787 Chlamydomonas reinhardtii
Cre12.g547000 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 8619402-8620401 Chlamydomonas reinhardtii
Cre12.g547000 2.0kb upstream 2.0kb upstream 3386 true chromosome_12: 8620402-8623787 Chlamydomonas reinhardtii
Cre12.g547000 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 8621788-8623787 Chlamydomonas reinhardtii
Cre12.g547000 2.0kb downstream 2.0kb downstream 3386 true chromosome_12: 8618402-8621787 Chlamydomonas reinhardtii
Cre12.g547000 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 8618402-8620401 Chlamydomonas reinhardtii
Cre12.g547000 5.0kb upstream 5.0kb upstream 6386 true chromosome_12: 8620402-8626787 Chlamydomonas reinhardtii
Cre12.g547000 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 8621788-8626787 Chlamydomonas reinhardtii
Cre12.g547000 5.0kb downstream 5.0kb downstream 6386 true chromosome_12: 8615402-8621787 Chlamydomonas reinhardtii
Cre12.g547000 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 8615402-8620401 Chlamydomonas reinhardtii
Cre12.g547000 10.0kb upstream 10.0kb upstream 11386 true chromosome_12: 8620402-8631787 Chlamydomonas reinhardtii
Cre12.g547000 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 8621788-8631787 Chlamydomonas reinhardtii
Cre12.g547000 10.0kb downstream 10.0kb downstream 11386 true chromosome_12: 8610402-8621787 Chlamydomonas reinhardtii
Cre12.g547000 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 8610402-8620401 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124108787 5260 Chlorophyte View MSA
123422864 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.188        
cufflinks 7.509        
cufflinks 1.867       Low
cufflinks 3.378        
cufflinks 6.218        
cufflinks 5.283        
cufflinks 6.587        
cufflinks 7.511        
cufflinks 5.721        
cufflinks 0.812       Low
cufflinks 1.013       Low
cufflinks 6.74        
cufflinks 1.143       Low
cufflinks 5.287        
cufflinks 3.494        
cufflinks 9.449        
cufflinks 10.36       High
cufflinks 3.68        
cufflinks 1.055       Low
cufflinks 7.287        
cufflinks 5.313        
cufflinks 9.152        
cufflinks 4.948        
cufflinks 5.58        
cufflinks 12.214     High High
cufflinks 24.1625 2.89355 45.4314   High
cufflinks 5.4142 0.0 11.0246    
cufflinks 6.04284 0.0 13.3729    
cufflinks 9.74412 1.61701 17.8712    
cufflinks 5.81488 0.405168 11.2246    

0 Strain