Gene : NOP56 C. reinhardtii v5.6
Primary Identifier:  ? Cre12.g525200 Defline:  (1 of 1) K14564 - nucleolar protein 56 (NOP56)
Genomic Order:  909 Name:  ? Cre12.g525200
Secondary Identifier:  ? PAC:30792563
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g525200 0.5kb upstream 0.5kb upstream 6184 true chromosome_12: 4876299-4882482 Chlamydomonas reinhardtii
Cre12.g525200 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 4876299-4876798 Chlamydomonas reinhardtii
Cre12.g525200 0.5kb downstream 0.5kb downstream 6184 true chromosome_12: 4876799-4882982 Chlamydomonas reinhardtii
Cre12.g525200 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 4882483-4882982 Chlamydomonas reinhardtii
Cre12.g525200 1.0kb upstream 1.0kb upstream 6684 true chromosome_12: 4875799-4882482 Chlamydomonas reinhardtii
Cre12.g525200 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 4875799-4876798 Chlamydomonas reinhardtii
Cre12.g525200 1.0kb downstream 1.0kb downstream 6684 true chromosome_12: 4876799-4883482 Chlamydomonas reinhardtii
Cre12.g525200 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 4882483-4883482 Chlamydomonas reinhardtii
Cre12.g525200 2.0kb upstream 2.0kb upstream 7684 true chromosome_12: 4874799-4882482 Chlamydomonas reinhardtii
Cre12.g525200 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 4874799-4876798 Chlamydomonas reinhardtii
Cre12.g525200 2.0kb downstream 2.0kb downstream 7684 true chromosome_12: 4876799-4884482 Chlamydomonas reinhardtii
Cre12.g525200 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 4882483-4884482 Chlamydomonas reinhardtii
Cre12.g525200 5.0kb upstream 5.0kb upstream 10684 true chromosome_12: 4871799-4882482 Chlamydomonas reinhardtii
Cre12.g525200 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 4871799-4876798 Chlamydomonas reinhardtii
Cre12.g525200 5.0kb downstream 5.0kb downstream 10684 true chromosome_12: 4876799-4887482 Chlamydomonas reinhardtii
Cre12.g525200 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 4882483-4887482 Chlamydomonas reinhardtii
Cre12.g525200 10.0kb upstream 10.0kb upstream 15684 true chromosome_12: 4866799-4882482 Chlamydomonas reinhardtii
Cre12.g525200 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 4866799-4876798 Chlamydomonas reinhardtii
Cre12.g525200 10.0kb downstream 10.0kb downstream 15684 true chromosome_12: 4876799-4892482 Chlamydomonas reinhardtii
Cre12.g525200 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 4882483-4892482 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109189 5260 Chlorophyte View MSA
123424801 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 39.261     High  
cufflinks 66.218     High High
cufflinks 33.145     High  
cufflinks 48.521     High  
cufflinks 53.582     High  
cufflinks 49.562     High  
cufflinks 52.197     High  
cufflinks 42.338     High  
cufflinks 40.588     High  
cufflinks 19.889     High  
cufflinks 45.974     High  
cufflinks 47.181     High  
cufflinks 14.281     High Low
cufflinks 55.909     High  
cufflinks 34.388     High  
cufflinks 64.183     High High
cufflinks 6.033       Low
cufflinks 39.723     High  
cufflinks 17.389     High  
cufflinks 28.964     High  
cufflinks 43.57     High  
cufflinks 9.824       Low
cufflinks 42.023     High  
cufflinks 38.08     High  
cufflinks 6.897       Low
cufflinks 208.93 9.08909 408.772 High High
cufflinks 142.906 18.065 267.748 High  
cufflinks 7.90685 0.0 15.9084   Low
cufflinks 85.9653 0.0 175.444 High Low
cufflinks 165.365 1.20828 329.522 High High

0 Strain