Gene : ALK1 C. reinhardtii v5.6
Primary Identifier:  ? Cre12.g529550 Defline:  (1 of 29) PTHR24349:SF79 - NITROGEN NETWORK KINASE 1
Genomic Order:  1020 Name:  ? Cre12.g529550
Secondary Identifier:  ? PAC:30792115
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g529550 0.5kb upstream 0.5kb upstream 5314 true chromosome_12: 5351764-5357077 Chlamydomonas reinhardtii
Cre12.g529550 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 5351764-5352263 Chlamydomonas reinhardtii
Cre12.g529550 0.5kb downstream 0.5kb downstream 5314 true chromosome_12: 5352264-5357577 Chlamydomonas reinhardtii
Cre12.g529550 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 5357078-5357577 Chlamydomonas reinhardtii
Cre12.g529550 1.0kb upstream 1.0kb upstream 5814 true chromosome_12: 5351264-5357077 Chlamydomonas reinhardtii
Cre12.g529550 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 5351264-5352263 Chlamydomonas reinhardtii
Cre12.g529550 1.0kb downstream 1.0kb downstream 5814 true chromosome_12: 5352264-5358077 Chlamydomonas reinhardtii
Cre12.g529550 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 5357078-5358077 Chlamydomonas reinhardtii
Cre12.g529550 2.0kb upstream 2.0kb upstream 6814 true chromosome_12: 5350264-5357077 Chlamydomonas reinhardtii
Cre12.g529550 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 5350264-5352263 Chlamydomonas reinhardtii
Cre12.g529550 2.0kb downstream 2.0kb downstream 6814 true chromosome_12: 5352264-5359077 Chlamydomonas reinhardtii
Cre12.g529550 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 5357078-5359077 Chlamydomonas reinhardtii
Cre12.g529550 5.0kb upstream 5.0kb upstream 9814 true chromosome_12: 5347264-5357077 Chlamydomonas reinhardtii
Cre12.g529550 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 5347264-5352263 Chlamydomonas reinhardtii
Cre12.g529550 5.0kb downstream 5.0kb downstream 9814 true chromosome_12: 5352264-5362077 Chlamydomonas reinhardtii
Cre12.g529550 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 5357078-5362077 Chlamydomonas reinhardtii
Cre12.g529550 10.0kb upstream 10.0kb upstream 14814 true chromosome_12: 5342264-5357077 Chlamydomonas reinhardtii
Cre12.g529550 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 5342264-5352263 Chlamydomonas reinhardtii
Cre12.g529550 10.0kb downstream 10.0kb downstream 14814 true chromosome_12: 5352264-5367077 Chlamydomonas reinhardtii
Cre12.g529550 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 5357078-5367077 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124113052 5260 Chlorophyte View MSA
123428287 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.333        
cufflinks 5.063        
cufflinks 22.822     High High
cufflinks 27.806     High High
cufflinks 4.252        
cufflinks 4.367        
cufflinks 4.518        
cufflinks 10.039        
cufflinks 4.07        
cufflinks 1.743       Low
cufflinks 42.611     High High
cufflinks 8.517        
cufflinks 3.742        
cufflinks 4.606        
cufflinks 13.258     High  
cufflinks 2.727       Low
cufflinks 4.402        
cufflinks 12.144        
cufflinks 2.156       Low
cufflinks 7.48        
cufflinks 12.396        
cufflinks 4.471        
cufflinks 5.26        
cufflinks 13.469        
cufflinks 4.909        
cufflinks 4.95254 0.835381 9.06969    
cufflinks 5.10112 1.09861 9.10363    
cufflinks 10.6718 0.0 21.4463    
cufflinks 7.67875 1.06843 14.2891    
cufflinks 11.0017 2.16868 19.8346   Low

0 Strain