Gene : Cre12.g529500 C. reinhardtii v5.6
Defline:  (1 of 1) 2.1.1.167 - 27S pre-rRNA (guanosine(2922)-2'-O)-methyltransferase Genomic Order:  1019
Name:  ? Cre12.g529500 Secondary Identifier:  ? PAC:30792231
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g529500 0.5kb upstream 0.5kb upstream 7287 true chromosome_12: 5344443-5351729 Chlamydomonas reinhardtii
Cre12.g529500 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 5344443-5344942 Chlamydomonas reinhardtii
Cre12.g529500 0.5kb downstream 0.5kb downstream 7287 true chromosome_12: 5344943-5352229 Chlamydomonas reinhardtii
Cre12.g529500 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 5351730-5352229 Chlamydomonas reinhardtii
Cre12.g529500 1.0kb upstream 1.0kb upstream 7787 true chromosome_12: 5343943-5351729 Chlamydomonas reinhardtii
Cre12.g529500 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 5343943-5344942 Chlamydomonas reinhardtii
Cre12.g529500 1.0kb downstream 1.0kb downstream 7787 true chromosome_12: 5344943-5352729 Chlamydomonas reinhardtii
Cre12.g529500 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 5351730-5352729 Chlamydomonas reinhardtii
Cre12.g529500 2.0kb upstream 2.0kb upstream 8787 true chromosome_12: 5342943-5351729 Chlamydomonas reinhardtii
Cre12.g529500 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 5342943-5344942 Chlamydomonas reinhardtii
Cre12.g529500 2.0kb downstream 2.0kb downstream 8787 true chromosome_12: 5344943-5353729 Chlamydomonas reinhardtii
Cre12.g529500 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 5351730-5353729 Chlamydomonas reinhardtii
Cre12.g529500 5.0kb upstream 5.0kb upstream 11787 true chromosome_12: 5339943-5351729 Chlamydomonas reinhardtii
Cre12.g529500 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 5339943-5344942 Chlamydomonas reinhardtii
Cre12.g529500 5.0kb downstream 5.0kb downstream 11787 true chromosome_12: 5344943-5356729 Chlamydomonas reinhardtii
Cre12.g529500 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 5351730-5356729 Chlamydomonas reinhardtii
Cre12.g529500 10.0kb upstream 10.0kb upstream 16787 true chromosome_12: 5334943-5351729 Chlamydomonas reinhardtii
Cre12.g529500 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 5334943-5344942 Chlamydomonas reinhardtii
Cre12.g529500 10.0kb downstream 10.0kb downstream 16787 true chromosome_12: 5344943-5361729 Chlamydomonas reinhardtii
Cre12.g529500 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 5351730-5361729 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109363 5260 Chlorophyte View MSA
123425494 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.649        
cufflinks 4.637        
cufflinks 2.321        
cufflinks 4.198        
cufflinks 3.398        
cufflinks 3.444        
cufflinks 4.597        
cufflinks 3.684        
cufflinks 1.287        
cufflinks 1.023        
cufflinks 6.261       High
cufflinks 4.493        
cufflinks 0.924        
cufflinks 3.353        
cufflinks 2.856        
cufflinks 3.447        
cufflinks 0.221       Low
cufflinks 2.367        
cufflinks 1.446        
cufflinks 1.768        
cufflinks 4.361        
cufflinks 0.672       Low
cufflinks 5.072        
cufflinks 3.948        
cufflinks 0.262       Low
cufflinks 31.3637 0.0 63.8162 High High
cufflinks 17.0866 4.38139 29.7918    
cufflinks 1.18968 0.0 2.6846   Low
cufflinks 8.12614 0.748722 15.5036   Low
cufflinks 21.7286 2.73464 40.7225   High

0 Strain