Gene : RPS27E1 C. reinhardtii v5.6
Primary Identifier:  ? Cre12.g529400 Defline:  (1 of 2) K02978 - small subunit ribosomal protein S27e (RP-S27e, RPS27)
Genomic Order:  1017 Name:  ? Cre12.g529400
Secondary Identifier:  ? PAC:30792485
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g529400 0.5kb upstream 0.5kb upstream 1958 true chromosome_12: 5337169-5339126 Chlamydomonas reinhardtii
Cre12.g529400 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 5338627-5339126 Chlamydomonas reinhardtii
Cre12.g529400 0.5kb downstream 0.5kb downstream 1958 true chromosome_12: 5336669-5338626 Chlamydomonas reinhardtii
Cre12.g529400 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 5336669-5337168 Chlamydomonas reinhardtii
Cre12.g529400 1.0kb upstream 1.0kb upstream 2458 true chromosome_12: 5337169-5339626 Chlamydomonas reinhardtii
Cre12.g529400 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 5338627-5339626 Chlamydomonas reinhardtii
Cre12.g529400 1.0kb downstream 1.0kb downstream 2458 true chromosome_12: 5336169-5338626 Chlamydomonas reinhardtii
Cre12.g529400 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 5336169-5337168 Chlamydomonas reinhardtii
Cre12.g529400 2.0kb upstream 2.0kb upstream 3458 true chromosome_12: 5337169-5340626 Chlamydomonas reinhardtii
Cre12.g529400 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 5338627-5340626 Chlamydomonas reinhardtii
Cre12.g529400 2.0kb downstream 2.0kb downstream 3458 true chromosome_12: 5335169-5338626 Chlamydomonas reinhardtii
Cre12.g529400 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 5335169-5337168 Chlamydomonas reinhardtii
Cre12.g529400 5.0kb upstream 5.0kb upstream 6458 true chromosome_12: 5337169-5343626 Chlamydomonas reinhardtii
Cre12.g529400 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 5338627-5343626 Chlamydomonas reinhardtii
Cre12.g529400 5.0kb downstream 5.0kb downstream 6458 true chromosome_12: 5332169-5338626 Chlamydomonas reinhardtii
Cre12.g529400 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 5332169-5337168 Chlamydomonas reinhardtii
Cre12.g529400 10.0kb upstream 10.0kb upstream 11458 true chromosome_12: 5337169-5348626 Chlamydomonas reinhardtii
Cre12.g529400 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 5338627-5348626 Chlamydomonas reinhardtii
Cre12.g529400 10.0kb downstream 10.0kb downstream 11458 true chromosome_12: 5327169-5338626 Chlamydomonas reinhardtii
Cre12.g529400 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 5327169-5337168 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109582 5260 Chlorophyte View MSA
123423805 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2781.12     High  
cufflinks 2062.29     High  
cufflinks 2342.18     High  
cufflinks 1842.27     High Low
cufflinks 2253.48     High  
cufflinks 2301.51     High  
cufflinks 3029.66     High  
cufflinks 1963.9     High  
cufflinks 2523.72     High  
cufflinks 5665.64     High High
cufflinks 1808.15     High Low
cufflinks 2076.54     High  
cufflinks 4051.8     High High
cufflinks 2486.38     High  
cufflinks 2369.7     High  
cufflinks 2330.24     High  
cufflinks 2115.93     High  
cufflinks 2425.22     High  
cufflinks 7488.85     High High
cufflinks 4015.53     High High
cufflinks 2442.15     High  
cufflinks 2246.01     High  
cufflinks 3754.97     High High
cufflinks 2241.79     High  
cufflinks 1878.79     High  
cufflinks 12392.6 4203.99 20581.2 High High
cufflinks 5806.03 357.063 11255.0 High  
cufflinks 4748.6 0.0 10144.6 High Low
cufflinks 6899.32 1528.76 12269.9 High  
cufflinks 4024.86 108.841 7940.87 High Low

0 Strain