Gene : PBA2 C. reinhardtii v5.6
Primary Identifier:  ? Cre12.g531100 Defline:  (1 of 2) K02738 - 20S proteasome subunit beta 1 (PSMB6)
Genomic Order:  1053 Name:  ? Cre12.g531100
Secondary Identifier:  ? PAC:30791746
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g531100 0.5kb upstream 0.5kb upstream 2686 true chromosome_12: 5510056-5512741 Chlamydomonas reinhardtii
Cre12.g531100 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 5510056-5510555 Chlamydomonas reinhardtii
Cre12.g531100 0.5kb downstream 0.5kb downstream 2686 true chromosome_12: 5510556-5513241 Chlamydomonas reinhardtii
Cre12.g531100 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 5512742-5513241 Chlamydomonas reinhardtii
Cre12.g531100 1.0kb upstream 1.0kb upstream 3186 true chromosome_12: 5509556-5512741 Chlamydomonas reinhardtii
Cre12.g531100 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 5509556-5510555 Chlamydomonas reinhardtii
Cre12.g531100 1.0kb downstream 1.0kb downstream 3186 true chromosome_12: 5510556-5513741 Chlamydomonas reinhardtii
Cre12.g531100 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 5512742-5513741 Chlamydomonas reinhardtii
Cre12.g531100 2.0kb upstream 2.0kb upstream 4186 true chromosome_12: 5508556-5512741 Chlamydomonas reinhardtii
Cre12.g531100 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 5508556-5510555 Chlamydomonas reinhardtii
Cre12.g531100 2.0kb downstream 2.0kb downstream 4186 true chromosome_12: 5510556-5514741 Chlamydomonas reinhardtii
Cre12.g531100 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 5512742-5514741 Chlamydomonas reinhardtii
Cre12.g531100 5.0kb upstream 5.0kb upstream 7186 true chromosome_12: 5505556-5512741 Chlamydomonas reinhardtii
Cre12.g531100 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 5505556-5510555 Chlamydomonas reinhardtii
Cre12.g531100 5.0kb downstream 5.0kb downstream 7186 true chromosome_12: 5510556-5517741 Chlamydomonas reinhardtii
Cre12.g531100 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 5512742-5517741 Chlamydomonas reinhardtii
Cre12.g531100 10.0kb upstream 10.0kb upstream 12186 true chromosome_12: 5500556-5512741 Chlamydomonas reinhardtii
Cre12.g531100 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 5500556-5510555 Chlamydomonas reinhardtii
Cre12.g531100 10.0kb downstream 10.0kb downstream 12186 true chromosome_12: 5510556-5522741 Chlamydomonas reinhardtii
Cre12.g531100 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 5512742-5522741 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111262 5260 Chlorophyte View MSA
123423963 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.291        
cufflinks 8.392        
cufflinks 9.139       High
cufflinks 7.071        
cufflinks 8.341        
cufflinks 8.039        
cufflinks 9.423       High
cufflinks 8.887       High
cufflinks 5.326        
cufflinks 3.493       Low
cufflinks 5.418        
cufflinks 6.249        
cufflinks 6.511        
cufflinks 8.106        
cufflinks 4.754        
cufflinks 5.557        
cufflinks 3.214       Low
cufflinks 7.909        
cufflinks 2.398       Low
cufflinks 5.13        
cufflinks 5.043        
cufflinks 3.465       Low
cufflinks 7.03        
cufflinks 7.288        
cufflinks 3.342       Low
cufflinks 19.6425 0.252478 39.0325   Low
cufflinks 30.3755 7.29435 53.4567 High  
cufflinks 34.6341 0.0 78.6146 High  
cufflinks 17.9089 0.0 36.4058   Low
cufflinks 29.8013 0.0 60.08 High  

0 Strain