Gene : IRT1 C. reinhardtii v5.6
Primary Identifier:  ? Cre12.g530400 Defline:  (1 of 5) K07238 - zinc transporter, ZIP family (TC.ZIP, zupT, ZRT3, ZIP2)
Genomic Order:  1037 Name:  ? Cre12.g530400
Secondary Identifier:  ? PAC:30791983
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g530400 0.5kb upstream 0.5kb upstream 4201 true chromosome_12: 5443696-5447896 Chlamydomonas reinhardtii
Cre12.g530400 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 5443696-5444195 Chlamydomonas reinhardtii
Cre12.g530400 0.5kb downstream 0.5kb downstream 4201 true chromosome_12: 5444196-5448396 Chlamydomonas reinhardtii
Cre12.g530400 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 5447897-5448396 Chlamydomonas reinhardtii
Cre12.g530400 1.0kb upstream 1.0kb upstream 4701 true chromosome_12: 5443196-5447896 Chlamydomonas reinhardtii
Cre12.g530400 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 5443196-5444195 Chlamydomonas reinhardtii
Cre12.g530400 1.0kb downstream 1.0kb downstream 4701 true chromosome_12: 5444196-5448896 Chlamydomonas reinhardtii
Cre12.g530400 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 5447897-5448896 Chlamydomonas reinhardtii
Cre12.g530400 2.0kb upstream 2.0kb upstream 5701 true chromosome_12: 5442196-5447896 Chlamydomonas reinhardtii
Cre12.g530400 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 5442196-5444195 Chlamydomonas reinhardtii
Cre12.g530400 2.0kb downstream 2.0kb downstream 5701 true chromosome_12: 5444196-5449896 Chlamydomonas reinhardtii
Cre12.g530400 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 5447897-5449896 Chlamydomonas reinhardtii
Cre12.g530400 5.0kb upstream 5.0kb upstream 8701 true chromosome_12: 5439196-5447896 Chlamydomonas reinhardtii
Cre12.g530400 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 5439196-5444195 Chlamydomonas reinhardtii
Cre12.g530400 5.0kb downstream 5.0kb downstream 8701 true chromosome_12: 5444196-5452896 Chlamydomonas reinhardtii
Cre12.g530400 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 5447897-5452896 Chlamydomonas reinhardtii
Cre12.g530400 10.0kb upstream 10.0kb upstream 13701 true chromosome_12: 5434196-5447896 Chlamydomonas reinhardtii
Cre12.g530400 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 5434196-5444195 Chlamydomonas reinhardtii
Cre12.g530400 10.0kb downstream 10.0kb downstream 13701 true chromosome_12: 5444196-5457896 Chlamydomonas reinhardtii
Cre12.g530400 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 5447897-5457896 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112275 5260 Chlorophyte View MSA
123426288 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.034     Low  
cufflinks 0.107     Low  
cufflinks 0.009     Low  
cufflinks 0.034     Low  
cufflinks 0.158        
cufflinks 0.021     Low  
cufflinks 0.011     Low  
cufflinks 0.004     Low Low
cufflinks 0.105        
cufflinks 0.005     Low  
cufflinks 0.006     Low  
cufflinks 0.006     Low  
cufflinks 9.279       High
cufflinks 0.024     Low  
cufflinks 0.257       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.082     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.031     Low  
cufflinks 0.068     Low  
cufflinks 0.01     Low  
cufflinks 0.009     Low  
cufflinks 0.003     Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.557489 0.0 1.35968    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 5.00137E-5 0.0 0.00326951 Low Low
cufflinks 4.66109E-5 0.0 0.00232077 Low Low

0 Strain