Gene : Cre13.g561900 C. reinhardtii v5.6
Defline:  (1 of 1) K03470 - ribonuclease HII (rnhB) Genomic Order:  3
Name:  ? Cre13.g561900 Secondary Identifier:  ? PAC:30784033
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre13.g561900 0.5kb upstream 0.5kb upstream 2652 true chromosome_13: 24876-27527 Chlamydomonas reinhardtii
Cre13.g561900 0.5kb upstream 0.5kb upstream 500 false chromosome_13: 24876-25375 Chlamydomonas reinhardtii
Cre13.g561900 0.5kb downstream 0.5kb downstream 2652 true chromosome_13: 25376-28027 Chlamydomonas reinhardtii
Cre13.g561900 0.5kb downstream 0.5kb downstream 500 false chromosome_13: 27528-28027 Chlamydomonas reinhardtii
Cre13.g561900 1.0kb upstream 1.0kb upstream 3152 true chromosome_13: 24376-27527 Chlamydomonas reinhardtii
Cre13.g561900 1.0kb upstream 1.0kb upstream 1000 false chromosome_13: 24376-25375 Chlamydomonas reinhardtii
Cre13.g561900 1.0kb downstream 1.0kb downstream 3152 true chromosome_13: 25376-28527 Chlamydomonas reinhardtii
Cre13.g561900 1.0kb downstream 1.0kb downstream 1000 false chromosome_13: 27528-28527 Chlamydomonas reinhardtii
Cre13.g561900 2.0kb upstream 2.0kb upstream 4152 true chromosome_13: 23376-27527 Chlamydomonas reinhardtii
Cre13.g561900 2.0kb upstream 2.0kb upstream 2000 false chromosome_13: 23376-25375 Chlamydomonas reinhardtii
Cre13.g561900 2.0kb downstream 2.0kb downstream 4152 true chromosome_13: 25376-29527 Chlamydomonas reinhardtii
Cre13.g561900 2.0kb downstream 2.0kb downstream 2000 false chromosome_13: 27528-29527 Chlamydomonas reinhardtii
Cre13.g561900 5.0kb upstream 5.0kb upstream 7152 true chromosome_13: 20376-27527 Chlamydomonas reinhardtii
Cre13.g561900 5.0kb upstream 5.0kb upstream 5000 false chromosome_13: 20376-25375 Chlamydomonas reinhardtii
Cre13.g561900 5.0kb downstream 5.0kb downstream 7152 true chromosome_13: 25376-32527 Chlamydomonas reinhardtii
Cre13.g561900 5.0kb downstream 5.0kb downstream 5000 false chromosome_13: 27528-32527 Chlamydomonas reinhardtii
Cre13.g561900 10.0kb upstream 10.0kb upstream 12152 true chromosome_13: 15376-27527 Chlamydomonas reinhardtii
Cre13.g561900 10.0kb upstream 10.0kb upstream 10000 false chromosome_13: 15376-25375 Chlamydomonas reinhardtii
Cre13.g561900 10.0kb downstream 10.0kb downstream 12152 true chromosome_13: 25376-37527 Chlamydomonas reinhardtii
Cre13.g561900 10.0kb downstream 10.0kb downstream 10000 false chromosome_13: 27528-37527 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110175 5260 Chlorophyte View MSA
123427271 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.054     Low Low
cufflinks 1.668       High
cufflinks 1.401        
cufflinks 1.279        
cufflinks 0.706        
cufflinks 0.877        
cufflinks 1.824       High
cufflinks 1.836       High
cufflinks 0.135       Low
cufflinks 0.093       Low
cufflinks 0.732        
cufflinks 1.25        
cufflinks 0.346        
cufflinks 0.839        
cufflinks 0.84        
cufflinks 0.106     Low Low
cufflinks 0.334        
cufflinks 0.811        
cufflinks 0.035     Low Low
cufflinks 0.473        
cufflinks 0.463        
cufflinks 0.19        
cufflinks 2.999       High
cufflinks 0.981        
cufflinks 0.435        
cufflinks 0.803609 0.0 1.71798   Low
cufflinks 1.08715 0.0 2.73129   Low
cufflinks 4.39864 0.0 9.99627   High
cufflinks 2.19468 0.0135063 4.37585    
cufflinks 1.75861 0.0 3.8303    

0 Strain