Gene : Cre13.g565650 C. reinhardtii v5.6
Defline:  (1 of 1) K05356 - all-trans-nonaprenyl-diphosphate synthase (SPS, sds) Genomic Order:  95
Name:  ? Cre13.g565650 Secondary Identifier:  ? PAC:30784500
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii PWY-6520 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre13.g565650 0.5kb upstream 0.5kb upstream 3500 true chromosome_13: 594907-598406 Chlamydomonas reinhardtii
Cre13.g565650 0.5kb upstream 0.5kb upstream 500 false chromosome_13: 594907-595406 Chlamydomonas reinhardtii
Cre13.g565650 0.5kb downstream 0.5kb downstream 3500 true chromosome_13: 595407-598906 Chlamydomonas reinhardtii
Cre13.g565650 0.5kb downstream 0.5kb downstream 500 false chromosome_13: 598407-598906 Chlamydomonas reinhardtii
Cre13.g565650 1.0kb upstream 1.0kb upstream 4000 true chromosome_13: 594407-598406 Chlamydomonas reinhardtii
Cre13.g565650 1.0kb upstream 1.0kb upstream 1000 false chromosome_13: 594407-595406 Chlamydomonas reinhardtii
Cre13.g565650 1.0kb downstream 1.0kb downstream 4000 true chromosome_13: 595407-599406 Chlamydomonas reinhardtii
Cre13.g565650 1.0kb downstream 1.0kb downstream 1000 false chromosome_13: 598407-599406 Chlamydomonas reinhardtii
Cre13.g565650 2.0kb upstream 2.0kb upstream 5000 true chromosome_13: 593407-598406 Chlamydomonas reinhardtii
Cre13.g565650 2.0kb upstream 2.0kb upstream 2000 false chromosome_13: 593407-595406 Chlamydomonas reinhardtii
Cre13.g565650 2.0kb downstream 2.0kb downstream 5000 true chromosome_13: 595407-600406 Chlamydomonas reinhardtii
Cre13.g565650 2.0kb downstream 2.0kb downstream 2000 false chromosome_13: 598407-600406 Chlamydomonas reinhardtii
Cre13.g565650 5.0kb upstream 5.0kb upstream 8000 true chromosome_13: 590407-598406 Chlamydomonas reinhardtii
Cre13.g565650 5.0kb upstream 5.0kb upstream 5000 false chromosome_13: 590407-595406 Chlamydomonas reinhardtii
Cre13.g565650 5.0kb downstream 5.0kb downstream 8000 true chromosome_13: 595407-603406 Chlamydomonas reinhardtii
Cre13.g565650 5.0kb downstream 5.0kb downstream 5000 false chromosome_13: 598407-603406 Chlamydomonas reinhardtii
Cre13.g565650 10.0kb upstream 10.0kb upstream 13000 true chromosome_13: 585407-598406 Chlamydomonas reinhardtii
Cre13.g565650 10.0kb upstream 10.0kb upstream 10000 false chromosome_13: 585407-595406 Chlamydomonas reinhardtii
Cre13.g565650 10.0kb downstream 10.0kb downstream 13000 true chromosome_13: 595407-608406 Chlamydomonas reinhardtii
Cre13.g565650 10.0kb downstream 10.0kb downstream 10000 false chromosome_13: 598407-608406 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111309 5260 Chlorophyte View MSA
123424009 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.74     High  
cufflinks 25.445     High  
cufflinks 12.005       Low
cufflinks 18.937     High  
cufflinks 24.046     High  
cufflinks 25.551     High  
cufflinks 27.653     High  
cufflinks 28.867     High  
cufflinks 28.507     High  
cufflinks 21.691     High  
cufflinks 6.813       Low
cufflinks 28.132     High  
cufflinks 20.833     High  
cufflinks 25.997     High  
cufflinks 21.382     High  
cufflinks 42.522     High High
cufflinks 42.442     High High
cufflinks 23.186     High  
cufflinks 6.679     High Low
cufflinks 15.026     High  
cufflinks 23.955     High  
cufflinks 44.475     High High
cufflinks 21.194     High  
cufflinks 27.154     High  
cufflinks 46.789     High High
cufflinks 369.252 9.82774 728.675 High  
cufflinks 42.9647 10.1119 75.8175 High  
cufflinks 35.5828 0.0 72.6088 High  
cufflinks 29.8376 0.760728 58.9146 High  
cufflinks 31.2799 4.50543 58.0543 High  

0 Strain