Gene : CGL112 C. reinhardtii v5.6
Primary Identifier:  ? Cre13.g566200 Defline:  (1 of 18) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH)
Genomic Order:  107 Name:  ? Cre13.g566200
Secondary Identifier:  ? PAC:30784351
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre13.g566200 0.5kb upstream 0.5kb upstream 5602 true chromosome_13: 661583-667184 Chlamydomonas reinhardtii
Cre13.g566200 0.5kb upstream 0.5kb upstream 500 false chromosome_13: 661583-662082 Chlamydomonas reinhardtii
Cre13.g566200 0.5kb downstream 0.5kb downstream 5602 true chromosome_13: 662083-667684 Chlamydomonas reinhardtii
Cre13.g566200 0.5kb downstream 0.5kb downstream 500 false chromosome_13: 667185-667684 Chlamydomonas reinhardtii
Cre13.g566200 1.0kb upstream 1.0kb upstream 6102 true chromosome_13: 661083-667184 Chlamydomonas reinhardtii
Cre13.g566200 1.0kb upstream 1.0kb upstream 1000 false chromosome_13: 661083-662082 Chlamydomonas reinhardtii
Cre13.g566200 1.0kb downstream 1.0kb downstream 6102 true chromosome_13: 662083-668184 Chlamydomonas reinhardtii
Cre13.g566200 1.0kb downstream 1.0kb downstream 1000 false chromosome_13: 667185-668184 Chlamydomonas reinhardtii
Cre13.g566200 2.0kb upstream 2.0kb upstream 7102 true chromosome_13: 660083-667184 Chlamydomonas reinhardtii
Cre13.g566200 2.0kb upstream 2.0kb upstream 2000 false chromosome_13: 660083-662082 Chlamydomonas reinhardtii
Cre13.g566200 2.0kb downstream 2.0kb downstream 7102 true chromosome_13: 662083-669184 Chlamydomonas reinhardtii
Cre13.g566200 2.0kb downstream 2.0kb downstream 2000 false chromosome_13: 667185-669184 Chlamydomonas reinhardtii
Cre13.g566200 5.0kb upstream 5.0kb upstream 10102 true chromosome_13: 657083-667184 Chlamydomonas reinhardtii
Cre13.g566200 5.0kb upstream 5.0kb upstream 5000 false chromosome_13: 657083-662082 Chlamydomonas reinhardtii
Cre13.g566200 5.0kb downstream 5.0kb downstream 10102 true chromosome_13: 662083-672184 Chlamydomonas reinhardtii
Cre13.g566200 5.0kb downstream 5.0kb downstream 5000 false chromosome_13: 667185-672184 Chlamydomonas reinhardtii
Cre13.g566200 10.0kb upstream 10.0kb upstream 15102 true chromosome_13: 652083-667184 Chlamydomonas reinhardtii
Cre13.g566200 10.0kb upstream 10.0kb upstream 10000 false chromosome_13: 652083-662082 Chlamydomonas reinhardtii
Cre13.g566200 10.0kb downstream 10.0kb downstream 15102 true chromosome_13: 662083-677184 Chlamydomonas reinhardtii
Cre13.g566200 10.0kb downstream 10.0kb downstream 10000 false chromosome_13: 667185-677184 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112762 5260 Chlorophyte View MSA
123429052 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.157        
cufflinks 12.091        
cufflinks 13.628        
cufflinks 18.448     High High
cufflinks 11.361        
cufflinks 12.44        
cufflinks 10.517        
cufflinks 20.252     High High
cufflinks 8.364        
cufflinks 5.031       Low
cufflinks 14.218     High  
cufflinks 17.105     High  
cufflinks 8.388        
cufflinks 10.557        
cufflinks 14.888     High  
cufflinks 9.283        
cufflinks 11.52        
cufflinks 17.507     High High
cufflinks 4.081       Low
cufflinks 16.151     High  
cufflinks 16.106     High  
cufflinks 11.86     High  
cufflinks 7.369       Low
cufflinks 16.343     High  
cufflinks 13.169     High  
cufflinks 15.0886 0.944245 29.2329    
cufflinks 10.8935 2.97071 18.8163   Low
cufflinks 14.0475 0.0 28.3254    
cufflinks 11.821 1.02397 22.6179    
cufflinks 11.128 2.10939 20.1466   Low

0 Strain