Gene : Cre13.g567850 C. reinhardtii v5.6
Defline:  (1 of 1) K11128 - H/ACA ribonucleoprotein complex subunit 1 (GAR1, NOLA1) Genomic Order:  146
Name:  ? Cre13.g567850 Secondary Identifier:  ? PAC:30784649
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre13.g567850 0.5kb upstream 0.5kb upstream 2958 true chromosome_13: 911597-914554 Chlamydomonas reinhardtii
Cre13.g567850 0.5kb upstream 0.5kb upstream 500 false chromosome_13: 911597-912096 Chlamydomonas reinhardtii
Cre13.g567850 0.5kb downstream 0.5kb downstream 2958 true chromosome_13: 912097-915054 Chlamydomonas reinhardtii
Cre13.g567850 0.5kb downstream 0.5kb downstream 500 false chromosome_13: 914555-915054 Chlamydomonas reinhardtii
Cre13.g567850 1.0kb upstream 1.0kb upstream 3458 true chromosome_13: 911097-914554 Chlamydomonas reinhardtii
Cre13.g567850 1.0kb upstream 1.0kb upstream 1000 false chromosome_13: 911097-912096 Chlamydomonas reinhardtii
Cre13.g567850 1.0kb downstream 1.0kb downstream 3458 true chromosome_13: 912097-915554 Chlamydomonas reinhardtii
Cre13.g567850 1.0kb downstream 1.0kb downstream 1000 false chromosome_13: 914555-915554 Chlamydomonas reinhardtii
Cre13.g567850 2.0kb upstream 2.0kb upstream 4458 true chromosome_13: 910097-914554 Chlamydomonas reinhardtii
Cre13.g567850 2.0kb upstream 2.0kb upstream 2000 false chromosome_13: 910097-912096 Chlamydomonas reinhardtii
Cre13.g567850 2.0kb downstream 2.0kb downstream 4458 true chromosome_13: 912097-916554 Chlamydomonas reinhardtii
Cre13.g567850 2.0kb downstream 2.0kb downstream 2000 false chromosome_13: 914555-916554 Chlamydomonas reinhardtii
Cre13.g567850 5.0kb upstream 5.0kb upstream 7458 true chromosome_13: 907097-914554 Chlamydomonas reinhardtii
Cre13.g567850 5.0kb upstream 5.0kb upstream 5000 false chromosome_13: 907097-912096 Chlamydomonas reinhardtii
Cre13.g567850 5.0kb downstream 5.0kb downstream 7458 true chromosome_13: 912097-919554 Chlamydomonas reinhardtii
Cre13.g567850 5.0kb downstream 5.0kb downstream 5000 false chromosome_13: 914555-919554 Chlamydomonas reinhardtii
Cre13.g567850 10.0kb upstream 10.0kb upstream 12458 true chromosome_13: 902097-914554 Chlamydomonas reinhardtii
Cre13.g567850 10.0kb upstream 10.0kb upstream 10000 false chromosome_13: 902097-912096 Chlamydomonas reinhardtii
Cre13.g567850 10.0kb downstream 10.0kb downstream 12458 true chromosome_13: 912097-924554 Chlamydomonas reinhardtii
Cre13.g567850 10.0kb downstream 10.0kb downstream 10000 false chromosome_13: 914555-924554 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110897 5260 Chlorophyte View MSA
123425060 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 45.934     High  
cufflinks 66.533     High High
cufflinks 31.538     High  
cufflinks 46.693     High  
cufflinks 54.638     High  
cufflinks 53.914     High  
cufflinks 50.57     High  
cufflinks 41.591     High  
cufflinks 44.808     High  
cufflinks 19.412     High  
cufflinks 44.387     High  
cufflinks 47.128     High  
cufflinks 15.073     High Low
cufflinks 60.701     High  
cufflinks 34.586     High  
cufflinks 79.055     High High
cufflinks 7.173       Low
cufflinks 38.279     High  
cufflinks 15.345     High Low
cufflinks 35.104     High  
cufflinks 45.549     High  
cufflinks 12.316     High Low
cufflinks 49.114     High  
cufflinks 35.432     High  
cufflinks 6.112       Low
cufflinks 222.531 0.0 455.908 High High
cufflinks 130.35 23.73 236.97 High  
cufflinks 8.15468 0.0 16.7572   Low
cufflinks 90.6212 0.0 184.271 High Low
cufflinks 199.441 4.30642 394.576 High High

0 Strain