Gene : CDD1 C. reinhardtii v5.6
Primary Identifier:  ? Cre13.g570550 Defline:  (1 of 1) 3.5.4.5 - Cytidine deaminase / Cytosine nucleoside deaminase
Genomic Order:  207 Name:  ? Cre13.g570550
Secondary Identifier:  ? PAC:30784576
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii PWY-6556 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-7193 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-7196 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-7199 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-7200 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre13.g570550 0.5kb upstream 0.5kb upstream 3924 true chromosome_13: 1250653-1254576 Chlamydomonas reinhardtii
Cre13.g570550 0.5kb upstream 0.5kb upstream 500 false chromosome_13: 1254077-1254576 Chlamydomonas reinhardtii
Cre13.g570550 0.5kb downstream 0.5kb downstream 3924 true chromosome_13: 1250153-1254076 Chlamydomonas reinhardtii
Cre13.g570550 0.5kb downstream 0.5kb downstream 500 false chromosome_13: 1250153-1250652 Chlamydomonas reinhardtii
Cre13.g570550 1.0kb upstream 1.0kb upstream 4424 true chromosome_13: 1250653-1255076 Chlamydomonas reinhardtii
Cre13.g570550 1.0kb upstream 1.0kb upstream 1000 false chromosome_13: 1254077-1255076 Chlamydomonas reinhardtii
Cre13.g570550 1.0kb downstream 1.0kb downstream 4424 true chromosome_13: 1249653-1254076 Chlamydomonas reinhardtii
Cre13.g570550 1.0kb downstream 1.0kb downstream 1000 false chromosome_13: 1249653-1250652 Chlamydomonas reinhardtii
Cre13.g570550 2.0kb upstream 2.0kb upstream 5424 true chromosome_13: 1250653-1256076 Chlamydomonas reinhardtii
Cre13.g570550 2.0kb upstream 2.0kb upstream 2000 false chromosome_13: 1254077-1256076 Chlamydomonas reinhardtii
Cre13.g570550 2.0kb downstream 2.0kb downstream 5424 true chromosome_13: 1248653-1254076 Chlamydomonas reinhardtii
Cre13.g570550 2.0kb downstream 2.0kb downstream 2000 false chromosome_13: 1248653-1250652 Chlamydomonas reinhardtii
Cre13.g570550 5.0kb upstream 5.0kb upstream 8424 true chromosome_13: 1250653-1259076 Chlamydomonas reinhardtii
Cre13.g570550 5.0kb upstream 5.0kb upstream 5000 false chromosome_13: 1254077-1259076 Chlamydomonas reinhardtii
Cre13.g570550 5.0kb downstream 5.0kb downstream 8424 true chromosome_13: 1245653-1254076 Chlamydomonas reinhardtii
Cre13.g570550 5.0kb downstream 5.0kb downstream 5000 false chromosome_13: 1245653-1250652 Chlamydomonas reinhardtii
Cre13.g570550 10.0kb upstream 10.0kb upstream 13424 true chromosome_13: 1250653-1264076 Chlamydomonas reinhardtii
Cre13.g570550 10.0kb upstream 10.0kb upstream 10000 false chromosome_13: 1254077-1264076 Chlamydomonas reinhardtii
Cre13.g570550 10.0kb downstream 10.0kb downstream 13424 true chromosome_13: 1240653-1254076 Chlamydomonas reinhardtii
Cre13.g570550 10.0kb downstream 10.0kb downstream 10000 false chromosome_13: 1240653-1250652 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111210 5260 Chlorophyte View MSA
123424852 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.165        
cufflinks 6.979       High
cufflinks 3.615        
cufflinks 3.376        
cufflinks 6.956       High
cufflinks 6.105        
cufflinks 5.092        
cufflinks 3.492        
cufflinks 5.736        
cufflinks 3.155        
cufflinks 1.775       Low
cufflinks 3.122        
cufflinks 2.794        
cufflinks 6.27        
cufflinks 1.97       Low
cufflinks 7.506       High
cufflinks 4.574        
cufflinks 5.029        
cufflinks 0.443       Low
cufflinks 3.265        
cufflinks 2.132        
cufflinks 4.392        
cufflinks 2.316        
cufflinks 3.074        
cufflinks 4.663        
cufflinks 32.8008 2.24211 63.3595 High High
cufflinks 39.1689 10.3702 67.9676 High High
cufflinks 10.1043 0.0 20.6981    
cufflinks 18.8186 2.26473 35.3724    
cufflinks 18.6581 3.6829 33.6334   High

0 Strain